Protein Overview: gi|155369303, gi...

General Information:
Name(s) found:	gi\|33086680 [NCBI NR] gi\|155369303 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|33086680\|gb\|AAP92652.1\| Da1-12 [Rattus norvegicus] [NCBI NR] gi\|155369303\|ref\|NP_001094445.1\| hypothetical protein LOC309243 [Rattus norvegicus] [NCBI NR] Da1-12 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Da1-12 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] vacuolar protein sorting 13A [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 DA1-12 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Vps13a Da1-12 [rat-ipi-250309-contam.fasta] Da1-12 OS=Rattus norvegicus GN=Vps13a [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	1446 amino acids
Gene Ontology:
Cellular Component:	cellular_component [ND]
Biological Process:	social behavior [UNKNOWN] biological_process [ND] locomotory behavior [UNKNOWN] nervous system development [UNKNOWN] protein localization [IEA]
Molecular Function:	protein binding [UNKNOWN] molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSYQLCEGI DFEEIIKHDG QLLKKKCRSI SPSKKSFVIN IVPEKDNLAS LSAYSEDGWD  60
   61 LPYVMHLWPP ILIRNLLPYK IAYYLEGIEN TVCTLSEGHS SQIYNVEMDQ AKLHLKLLDY 120
  121 LNHDWKSEFQ IDPNQQDINF INFTCLTEME KSDLDIAIHM TYNTGQTVVA FHSPYWMVNK 180
  181 TNRMLQYKAD GIHRKHPPNY KKPVLFSFQP NHFFNNNKVQ LMVTDSELSD QFSIDTVGSH 240
  241 GAIKCKGLKM EYQVGVTIDL SSFNITRIVT FIPFYMIKNK SRYHISVTEE GSDKWLSLDL 300
  301 EQLKSKWIKD LHVKPDTLKL IEEKVGKNLE HMGTGENFLN KTPMAYALRS SIDKWDLIKL 360
  361 QSFCKAKDTV ISTKRQPTDW EKIFINPTSG RGLISKICKE LKKLDSREPN NPIKKWVERS 420
  421 EGPPKRIYFN KQDSCILLRL DNELGGVIAE VNLAEHSTVI TFSDYHEGAA TFLLINHTKS 480
  481 DPVQYNQSSL SEIEDSLPPG KAVYYTWADP VGSRKLKWSC GQSYGEVTHK DGDKDGSICL 540
  541 HIKPDTLKLI EEKLGKHLEY MGTGKNFLNK TPMAYALRSR IDKWDLIKLQ SFCKAKDTVV 600
  601 RTKRQPTDWE KIFTNPTTDR GLISKIYKEL KKLDRRETNN PIKKWGSELN KEFTAEECRM 660
  661 AEKHLKKCST SLVIREMQIK TTLRFHLTPV RLAKIKNSGD SRCWRGCGER GTLLHCWWDC 720
  721 RLVKPFWKSV WRFLRKLDIE LPEDPAIPLL GIYPKDASTY KRDTCSTMFI AALFIIARKW 780
  781 KEPRCPSTEE WIQKMWYIYT MEYYSAIKNN EFMKFVGKWL ELENIILSEL TQSQKDIHAL 840
  841 FIIARSWKEP RCPSTEEWIQ KMWYIYTMEY YSAIKNNEFM KFVGKWLELE NIILSELTQS 900
  901 QKDIHGLQRI ILFTEDPRVF KVTYESEKAE LAELEVVLAL QDVGISLVNN YTKQEVAYIG 960
  961 ITSSDVVWET KPKKKSRWKP MSVKHTEKLE KEFREYTESS PLEDKVVELD NSIPVLLTPS1020
 1021 GNDMKILEPH VIAVRRNYLP ALKVEYNTSA HQSSFRIQIY RIQIQNQIHG AIFPFVFYPI1080
 1081 KPPRSVTMDS APKPFTDVSI VMRSAGHSQI SRIKYFKVLI QEMDLRLDLG FVYALADLVP1140
 1141 KTEVTEKTEV EYFHRDVEAF EQEFEVVSSV DQSQVNLFEY FHISPIKAIK QMYVLILGLD1200
 1201 VLGNPFGLIR EFSEGVEAFF YEPYQGAIQG PEEFVEGMAL GLKALVGGAV GGLAGAASKI1260
 1261 TSAMAKGVAA MTMDEDYQQK RREAMNKQPA GLREGITRGG KGLVSVRFPW AYKHMQEWLL1320
 1321 SHNCMSKEKG AQKEGAAGFF KGVGKGLVGA VARPTGGIID MASSTFQGIK RATETSEVES1380
 1381 LRPPRFFNED GVIRPYRLRD GTGNQMLQAS EEMFYKLKSI SQFRNIKAYR EWILTHSSSS1440
 1441 DEEEEA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.89

Protein Overview: gi|155369303, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: