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Protein Overview: MED25_ARATH

General Information:
Name(s) found: MED25_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Mediator of RNA polymerase II transcription subunit 25 OS=Arabidopsis thaliana GN=MED25 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 836 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    mediator complex [IDA]
    Biological Process: positive regulation of defense response [IMP]
    regulation of flower development [IMP]
    red, far-red light phototransduction [IMP]
    response to far red light [IMP]
    positive regulation of transcription [IMP]
    defense response to fungus [IMP]
    jasmonic acid mediated signaling pathway [IMP]
    response to red light [IMP]
    Molecular Function: transcription coactivator activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEVKQLIV VAEGTAALGP YWQTIVSDYL EKIIRSFCGS ELNGERNPVS TVELSLVIFN  60
   61 SHGSYCACLV QRSGWTRDVD IFLHWLSSIQ FGGGGFNEVA TAEGLAEALM MFSPPSGQAQ 120
  121 PSNDLKRHCI LITASNPHIL PTPVYRPRLQ NVERNENGDA QAESRLSDAE TVASYFAKCS 180
  181 VSLSVVCPKQ LPTIRALYNA GKPNQQSADL SIDTAKNTFY LVLISENFVE ACAALSHSAT 240
  241 NLPQTQSPVK VDRATVAPSI PVTGQPPAPV SSANGPIQNR QPVSVGPVPT ATVKVEPSTV 300
  301 TSMAPVPSFP HIPAVARPAT QAIPSIQTSS ASPVSQDMVS NAENAPDIKP VVVSGMTPPL 360
  361 RTGPPGGANV NLLNNLSQVR QVMSSAALAG AASSVGQSAV AMHMSNMIST GMATSLPPSQ 420
  421 TVFSTGQQGI TSMAGSGALM GSAQTGQSPG PNNAFSPQTT SNVASNLGVS QPMQGMNQGS 480
  481 HSGAMMQGGI SMNQNMMSGL GQGNVSSGTG GMMPTPGVGQ QAQSGIQQLG GSNSSAPNMQ 540
  541 LSQPSSGAMQ TSQSKYVKVW EGNLSGQRQG QPVLITRLEG YRSASASDSL AANWPPTMQI 600
  601 VRLISQDHMN NKQYVGKADF LVFRAMSQHG FLGQLQDKKL CAVIQLPSQT LLLSVSDKAC 660
  661 RLIGMLFPGD MVVFKPQIPN QQQQQQQQLH QQQQQQQQIQ QQQQQQQHLQ QQQMPQLQQQ 720
  721 QQQHQQQQQQ QHQLSQLQHH QQQQQQQQQQ QQQHQLTQLQ HHHQQQQQAS PLNQMQQQTS 780
  781 PLNQMQQQTS PLNQMQQQQQ PQQMVMGGQA FAQAPGRSQQ GGGGGQPNMP GAGFMG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] deduced N/A No confident structure predictions are available.
    2 View Details [207..442] PSI-BLAST 3.69897 Sec24
    3 View Details [443..554] deduced N/A No confident structure predictions are available.
    4 View Details [555..836] PSI-BLAST 14.0 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

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