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Protein Overview: gi|15806354, gi|...

General Information:
Name(s) found: gi|6459090 [NCBI NR]
gi|15806354 [NCBI NR]
Description(s) found:
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  • gi|6459090|gb|AAF10909.1|AE001980_4 transaldolase [Deinococcus radiodurans R1] [NCBI NR]
  • gi|15806354|ref|NP_295060.1| transaldolase [Deinococcus radiodurans R1] [NCBI NR]
  • transaldolase [Deinococcus radiodurans R1]gi|6459090|gb|AAF10909.1| transaldolase [Deinococcus radiodurans]gi|7473983|pir||G75407 transaldolase - Deinococcus radiodurans (strain R1) [nrdb_11152004_Chlamydomonas]
  • transaldolase [Deinococcus radiodurans R1] [nr-271106-contam.fasta]
    • Organism: Deinococcus radiodurans R1
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWPEGRAPV APEQGAPGPF FSDRGGVCWR HPAQVRQGKS GAGPAVPLRR THMEFFIDTA  60
   61 IVDEIREINA WGVLSGVTTN PSLIVASGRD FKEVIGEIAE LVPGGAISAE VTALDAEGMI 120
  121 KEGKDVAAWH KQVVVKLPLT PAGLQACKAL TSEGIKTNVT LCFSVPQALL AARAGATYVS 180
  181 PFVGRVDDTG WDGSELIRQI KEAFVLGDIQ TKVLAASIRH PQHVVQAALA GADVATIPYK 240
  241 VFTQMVKHPL TQAGLDSFMA DWAKRQGASP ETPPSEAGTN PVKKEG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 78.30103 Crystal structure of Transaldolase (EC 2.2.1.2) (TM0295) from Thermotoga maritima at 2.40 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring aldehyde or ketonic groups
    		•  3.28746773527289 bayes_pls_golite062009
  • transaldolase activity
    		•  2.77878684721788 bayes_pls_golite062009
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  1.41110985630781 bayes_pls_golite062009
  • porphobilinogen synthase activity
    		•  0.658378297259497 bayes_pls_golite062009
  • fructose binding
    		•  0.427637212154492 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.351872954170322 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.0319140634878892 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle