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Protein Overview: gi|3261706, gi|1...

General Information:
Name(s) found: gi|3261706 [NCBI NR]
gi|15607546 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|3261706|emb|CAB06605.1| PROBABLE MEMBRANE BOUND POLYKETIDE SYNTHASE PKS6 [Mycobacterium tuberculosis H37Rv] [NCBI NR]
  • gi|15607546|ref|NP_214919.1| membrane bound polyketide synthase [Mycobacterium tuberculosis H37Rv] [NCBI NR]
    • Organism: Mycobacterium tuberculosis H37Rv
    Length: 1402 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDGSVTADK LQKWFREYLS THIECHPNEV SLDVPIRDLG LKSIDVLAIP GDLGDRFGFC  60
   61 IPDLAVWDNP SANDLIDSLL NQRSADSLRE SHGHADRNTQ GRGSINEPVA VIGVGCRFPG 120
  121 DIDGPERLWD FLTEKKCAIT AYPDRGFTNA GTFAESGGFL KDVAGFDNRF FDIPPDEALR 180
  181 MDPQQRLLLE VSWEALEHAG IIPESLRLSR TGVFVGVSST DYVRLVSASA QQKSTIWDNT 240
  241 GGSSSIIANR ISYFLDIQGP SIVIDTACSS SLVAVHLACR SLSTWDCDIA LVGGTNVLIS 300
  301 PEPWGGFREA GILSQTGCCH AFDKSADGMV RGEGCGVIVL QRLSDARLEG RRILAILTGS 360
  361 AVNQDGKSNG IMAPNPSAQI GVLENACKSA RVDPLEIGYV EAHGTGTSLG DRIEAHALGM 420
  421 VFGRKRPGSG PLMIGSIKPN IGHLEGAAGI AGLIKAVLMV ERGSLLPSGG FTEPNPAIPF 480
  481 TELGLRVVDE LQEWPVVAGR PRRAGVSSFG FGGTNAHVIV EEAGSVGADT VSGRADVGGS 540
  541 GGGVVAWVIS GKTASALAAQ AGRLGRYVRA RPALDVVDVG YSLVSTRSVF DHRAVVVGQT 600
  601 RDELLAGLAG VVAGRPEAGV VCGVGKPAGK TAFVFAGQGS QWLGMGSELY AAYPVFAEAL 660
  661 DAVVDELDRH LRYPLRDVIW GHDQDLLNTT EFAQPALFAV EVALYRLLMS WGVRPGLVLG 720
  721 HSVGELAAAH VAGALCLPDA AMLVAARGRL MQALPAGGAM FAVQAREDEV APMLGHDVSI 780
  781 AAVNGPASVV ISGAHDAVSA IADRLRGQGR RVHRLAVSHA FHSALMEPMI AEFTAVAAEL 840
  841 SVGLPTIPVI SNVTGQLVAD DFASADYWAR HIRAVVRFGD SVRSAHCAGA SRFIEVGPGG 900
  901 GLTSLIEASL ADAQIVSVPT LRKDRPEPVS VMTAAAQGFV SGMGLDWASV FSGYRPKRVE 960
  961 LPTYAFQHQK FWLAPAPSVS DPTAAGQIGA SDGGAELLAS SGFAARLAGR SADEQLAAAI1020
 1021 EVVCEHAAAV LGRDGAAGLD AGQAFADSGF NSLSAVELRN RLTAVTAVTL PATAIFDHPT1080
 1081 PTELAQYLIT QIDGHGSSAA AAANPAERID ALTDLFLQAC DAGRDADGWK MVALASNTRE1140
 1141 RMSSPVRNNV SKNVALLADG ISDVVVICIP TLTVLSDQRE YRDIANAMTG RHSVYSLTLP1200
 1201 GFDSSDALPQ NADMIVETVS NAIIDVVGGS CRFVLSGYSS GGVLAYALCS HLSVKHQRNP1260
 1261 LGVALIDTYL PSQIANPSMN EGFSPNDTGK GLSREVIRVA RMLNRLTATR LTAAATYAAI1320
 1321 FQAWEPGRSM APVLNIVAKD RIATVENLRE ERINRWRTAA AEAAYSVAEV PGDHFGMMST1380
 1381 SSEAIATEIH DWISGLVRGP HR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] PSI-BLAST 10.39794 No description for 2ju1A was found.
    2 View Details [95..978] PSI-BLAST 1000.0 No description for 2hg4A was found.
    3 View Details [979..1098] FFAS03 4.87 No description for 2ju1A was found.
    4 View Details [1099..1402] PSI-BLAST 22.045757 No description for 2h7xA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • lipase activity
    		•  0.849473630399459 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.424330502936163 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.264183693934251 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle