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Protein Overview: gi|49613915, gi|...

General Information:
Name(s) found: gi|50123389 [NCBI NR]
gi|49613915 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|50123389|ref|YP_052556.1| transcriptional regulator PhoU [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
  • gi|49613915|emb|CAG77368.1| phosphate transport system protein [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
    • Organism: Pectobacterium atrosepticum SCRI1043
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLNLNKHI SGQFNAELEH IRTQVLTMGG LVEQQLSDAI TAMHNQDAEL AQQVIEGDSK  60
   61 VNMMEVAIDE ACVRIIAKRQ PTASDLRLVM AIIKTISELE RIGDVADKIC RTALEKFSHQ 120
  121 HQPLLVSLES LGRHTVQMLH DVLDAFARMD LDEAIRIYRE DKKVDKEYEG IVRQLMTHMM 180
  181 EDPRTIPSVL TALFCARSIE RIGDRCQNIC EFIFYFVKGQ DFRHLGGDAL EKLLAQKEKK 240
  241 EEEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 44.0 Crystal structure of phosphate transport system protein phoU from Aquifex aeolicus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.52706367695557 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.40207651011289 bayes_pls_golite062009
  • DNA binding
    		•  1.39485368870356 bayes_pls_golite062009
  • transcription factor activity
    		•  1.27583598395229 bayes_pls_golite062009
  • binding
    		•  0.775039544296942 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle