YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|49613720, gi|...

General Information:
Name(s) found: gi|50123194 [NCBI NR]
gi|49613720 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|50123194|ref|YP_052361.1| putative carbon-nitrogen hydrolase [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
  • gi|49613720|emb|CAG77171.1| putative carbon-nitrogen hydrolase [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
    • Organism: Pectobacterium atrosepticum SCRI1043
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVTVAATQ MACSWDLPKN IENAEKLVRQ AHAKGAQVIL IQELFAAPYF CIDQSPEHYA  60
   61 LAQELETSPL IKHFSALAAE LNVVLPLSFF ERANNAYYNS LVMIDADGSV LDVYRKTHIP 120
  121 NGPAYQEKQF FIPGDTGFKV WQTRYAKIGV GICWDQWFPE TARSLALQGA ELIFYPTAIG 180
  181 SEPAYPDIDS QPHWTRVQQG HAAANLVPVI ASNRIGTEAS KYIDGLEMTF YGSSFIADQT 240
  241 GALLAQANKT DEAILVHEFD LEAIAAQRAS WGLFRDRRPE MYGTIASSDG KTRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..294] PSI-BLAST 60.09691 hypothetical protein yl85

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.35962310800332 bayes_pls_golite062009
  • N-carbamoylputrescine amidase activity
    		•  0.749539597459006 bayes_pls_golite062009
  • hydrolase activity
    		•  0.06604196264626 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle