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Protein Overview: gi|50119144, gi|...

General Information:
Name(s) found: gi|50119144 [NCBI NR]
gi|49609670 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50119144|ref|YP_048311.1| putative carboxymethylenebutenolidase [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
  • gi|49609670|emb|CAG73103.1| putative carboxymethylenebutenolidase [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
    • Organism: Pectobacterium atrosepticum SCRI1043
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTDEQTTFK HLPQRLSPAV EPQSFSIITT DSVGIIASET TIPSQGEQLP AYIARPANHD  60
   61 GPLPIVLVVQ EIFGVHQHIQ DVCRRLAKQG YMAIAPELYF RQGDPSQYND IQQILTELVH 120
  121 KVPDTQVLSD LDHTANWAIK QGGDASKLAI TGFCWGGRIT WLYAAHNPQL KAAVAWYGKF 180
  181 TGEKTLNSPK NPVDIATELE APVLGLYGAK DGSIPLEHVD IMRQALRAAN ATAEIIVYPD 240
  241 AGHAFHADYR PSYHEESARD GWQRMLAWFQ KNGVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..275] PSI-BLAST 24.69897 Crystal structure of an acylpeptide hydrolase/esterase from Aeropyrum pernix K1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.58619437002934 bayes_pls_golite062009
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.635759022538529 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle