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Protein Overview: gi|30260514, gi|...

General Information:
Name(s) found: gi|30260514 [NCBI NR]
gi|30253882 [NCBI NR]
Description(s) found:
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  • gi|30260514|ref|NP_842891.1| alkyl hydroperoxide reductase, F subunit [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30253882|gb|AAP24377.1| alkyl hydroperoxide reductase, F subunit [Bacillus anthracis str. Ames] [NCBI NR]
  • probable alkyl hydroperoxide reductase, subunit F [Bacillus thuringiensis serovar konkukian str. 97-27]gi|49183357|ref|YP_026609.1| alkyl hydroperoxide reductase, F subunit [Bacillus anthracis str. Sterne]gi|47525611|ref|YP_016960.1| alkyl hydroperoxide [nrdb_11152004_Chlamydomonas]
  • alkyl hydroperoxide reductase, F subunit [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 508 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: alkyl hydroperoxide reductase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILDADIKTQ LSQYLQLMEN DILLKVSAGN DDVSKDMLAL VDELATMSSK ITVEKVELER  60
   61 TPSFSVNRPG EDTGVVFAGI PLGHEFTSLV LALLQVSGRA PKVEQKLIDQ IKNIQGEYHF 120
  121 ESYISLSCHN CPDVVQALNV MSVLNSGITH TMIDGAAFKE EVESKDIMAV PTVFLNGESF 180
  181 GSGRMTLEEI LAKMGNGPDA SELSDKDPYD VLVVGGGPAG ASAAIYAARK GIRTGIVAER 240
  241 FGGQVMDTMG IENFISVKRT EGPKLVASLE EHVKEYDIDV MNLQRAKRLE KKELIEVELE 300
  301 NGAILKSKSV IVSTGARWRN VGVPGEAEFK NKGVAYCPHC DGPLFTGKDV AVIGGGNSGI 360
  361 EAAIDLAGIV KHVTVLEFMP ELKADAVLQE RLNSLPNVTV LKNVQTKEIT GTDKVNGISY 420
  421 IDRETEEVHH VELQGVFVQI GLVPNTDWLG ETVERVRGEI VTDKHGATNV PGVFAAGDCT 480
  481 NNPYKQIIIS MGSGANAALG AFDYLIRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..508] PSI-BLAST 91.0 Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains; Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alkyl hydroperoxide reductase activity
    		•  4.29610283853788 bayes_pls_golite062009
  • antioxidant activity
    		•  3.66884588063322 bayes_pls_golite062009
  • oxidoreductase activity, acting on peroxide as acceptor
    		•  3.43831566988273 bayes_pls_golite062009
  • peroxidase activity
    		•  3.43831566988273 bayes_pls_golite062009
  • glutathione peroxidase activity
    		•  2.56524997297011 bayes_pls_golite062009
  • peroxiredoxin activity
    		•  2.12777217096121 bayes_pls_golite062009
  • thioredoxin peroxidase activity
    		•  1.96134566495756 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.8187537496904 bayes_pls_golite062009
  • disulfide oxidoreductase activity
    		•  1.32811008894503 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.863338015474945 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.69501605197281 bayes_pls_golite062009
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • selenium binding
    		•  0.619569799903221 bayes_pls_golite062009
  • binding
    		•  0.618139748326926 bayes_pls_golite062009
  • hydrolase activity
    		•  0.517269321619613 bayes_pls_golite062009
  • protein binding
    		•  0.134341907247724 bayes_pls_golite062009
  • protein disulfide oxidoreductase activity
    		•  0.0719543694089202 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle