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Protein Overview: gi|30260045, gi|...

General Information:
Name(s) found: gi|30265367 [NCBI NR]
gi|30260045 [NCBI NR]
Description(s) found:
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  • gi|30265367|ref|NP_847744.1| 3-hydroxybutyryl-CoA dehydrogenase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30260045|gb|AAP29230.1| 3-hydroxyacyl-CoA dehydrogenase [Bacillus anthracis str. Ames] [NCBI NR]
  • 3-hydroxyacyl-CoA dehydrogenase [Bacillus anthracis str. Sterne]gi|47530909|ref|YP_022258.1| 3-hydroxyacyl-CoA dehydrogenase [Bacillus anthracis str. 'Ames Ancestor']gi|30265367|ref|NP_847744.1| 3-hydroxyacyl-CoA dehydrogenase [Bacillus anthracis str. A [nrdb_11152004_Chlamydomonas]
  • 3-hydroxyacyl-CoA dehydrogenase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • 3-hydroxybutyryl-CoA dehydrogenase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fatty acid catabolic process [ISSLink to PubMed article]
    Molecular Function: 3-hydroxyacyl-CoA dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVQKIVVIG AGQMGSGIAQ VCAMAGYDVK VQDLKQEQLD RGLAITTKNL ARQVEKGRMK  60
   61 EEEKEATLNR LTVTLDLDCV KEADLIIEAA VEKMDIKKKI FANLDEIAPE HAILATNTSS 120
  121 LPITEIAAVT KRPEKVIGMH FMNPVPVMKL VEIIRGLATD DAVYETIEDI TKKIGKVPVE 180
  181 VNDFPGFVSN RILLPMINEA IYTLYEGVAT KEAIDEVMKL GMNHPMGPLT LADFIGLDTC 240
  241 LYIMEVLHEG LGDSKYRPCP LLRKYVNAGW LGRKTGRGFY VYE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 62.69897 Short chain L-3-hydroxyacyl CoA dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  3.32932637997329 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  2.05128385305465 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.96484346513217 bayes_pls_golite062009
  • catalytic activity
    		•  1.83291384546132 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  1.53235113426441 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  1.25489401408719 bayes_pls_golite062009
  • binding
    		•  1.10054369202721 bayes_pls_golite062009
  • transporter activity
    		•  0.793769336118517 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.788034697021177 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.715028113460127 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.635891484075352 bayes_pls_golite062009
  • retinol dehydrogenase activity
    		•  0.530688665000667 bayes_pls_golite062009
  • phosphogluconate dehydrogenase (decarboxylating) activity
    		•  0.44449320501876 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.439912268968251 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.300373102236296 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.239024094835991 bayes_pls_golite062009
  • protein binding
    		•  0.215925602689574 bayes_pls_golite062009
  • signal transducer activity
    		•  0.201915860594054 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.201915860594054 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.165260811069909 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  0.0962368786590111 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.0257250793986203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.60

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle