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Protein Overview: gi|30259904, gi|...

General Information:
Name(s) found: gi|30265227 [NCBI NR]
gi|30259904 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30265227|ref|NP_847604.1| polysaccharide deacetylase, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259904|gb|AAP29090.1| polysaccharide deacetylase, putative [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [ISSLink to PubMed article]
    Molecular Function: deacetylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRVFQYII LFLTITMYAS PHAGATTIPP AEHHPNTETT SSTKKIAYLT FDDGPNKYTT  60
   61 QILNILKEKN GKATFFVIGG KVPHYKKTMQ RLIKDGHYIG LHSMSHDVKR LYTGDPSALI 120
  121 TEMEQTQNIV QQVTELNTHL VRVPYGSMPY LKKNYRDALV SAQYKMWDWT IDTYDWKSYD 180
  181 NPSAILERVR NQSDEQVEVI LMHDSSVTVQ ILPQVIDYLQ SQGYKLLPYN PSSHLKVNFW 240
  241 KDTRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 43.69897 Structure of Streptococcus pneumoniae peptidoglycan deacetylase ( SpPgdA)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.54926008475976 bayes_pls_golite062009
  • deacetylase activity
    		•  1.07373873416936 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.04159714419468 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.78725677170464 bayes_pls_golite062009
  • hydrolase activity
    		•  0.7139390771237 bayes_pls_golite062009
  • mannosidase activity
    		•  0.32530435999467 bayes_pls_golite062009
  • binding
    		•  0.097268039040833 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle