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Protein Overview: gi|30259845, gi|...

General Information:
Name(s) found: gi|30265168 [NCBI NR]
gi|30259845 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30265168|ref|NP_847545.1| RNA polymerase factor sigma-54 [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259845|gb|AAP29031.1| RNA polymerase sigma-54 factor [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 435 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transcription initiation [ISSLink to PubMed article]
    Molecular Function: sigma factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASLLQEQS LRLAMTQELR QAITMLQYNV QELSEFLYEQ SLENPLIELG GFEREKKKSS  60
   61 NTSKSTSKQV ENQMEIYSVD STTIQQHLLN QIQYYKIEEE ERKVASFIIM NMDGNGYLQE 120
  121 TNEELANLLS APLHVVDRSV ELVQSLEPAG VGARNIKECL TLQLKRLQRR NGLAEEVVED 180
  181 HFAYFVKKDW RKLVQVLKCS NEELQDAVNC ITSLQPKPGL AFSSDKPLYI VPDMAVKKDG 240
  241 DRLVLQMNER NMPRIEIHSE YSALLNNSES EVASYVSEKY QHVQWIMRSL KQRKQTLLQV 300
  301 MTIIMEKQRD FFWKGPDYLK PLALKEVAEE LSVHESTISR ATRNKYVQTP HGLFEMKSFF 360
  361 SNAVSTTEDE AVSTKRVKQF IQTLVEAENK KKPLSDQKIS KLLEEEHEIV ISRRTVAKYR 420
  421 EQMHIPASSL RKTIG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..268] Pfam 38.236572 No description for PF04963.4 was found. No confident structure predictions are available.
    2 View Details [269..366] Pfam 10.136677 No description for PF04552.4 was found. No confident structure predictions are available.
    3 View Details [367..435] PSI-BLAST 19.69897 Solution Structure of the C-terminal RpoN Domain of Sigma-54 from Aquifex aeolicus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle