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Protein Overview: gi|30265006, gi|...

General Information:
Name(s) found: gi|30265006 [NCBI NR]
gi|30259683 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30265006|ref|NP_847383.1| transcriptional activator tipA, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259683|gb|AAP28869.1| transcriptional activator tipA, putative [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to antibiotic [ISSLink to PubMed article]
    regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    Molecular Function: transcription activator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKVKEVAN LVGISVRTLH HYDEIGLLTP DETTESGYRL YSNENLEMLQ QILFFKELGF  60
   61 PLKKIKEIIM SPSFDRKEAL QLHKKMLLEK RARLDKVIAT IDKTIQHTKG EIEMTNKEKF 120
  121 KGFDFSHNPY EEEARERWGD AAVDKANEYA KGMSKEKQEE FNAIYRNLAA LRHGAPDSKE 180
  181 AQEAIKVWYD YLQNFSHYSL DAFKGLGQMY VADERFTKNI DKFGEGLAQF MCDAMEVYAD 240
  241 RNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] PSI-BLAST 21.39794 Multidrug transporter activator MtaN
    2 View Details [124..243] PSI-BLAST 21.39794 Transcriptional activator TipA-S

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.40729334364274 bayes_pls_golite062009
  • DNA binding
    		•  2.05877861880033 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.99474406643819 bayes_pls_golite062009
  • transcription factor activity
    		•  1.84836087644732 bayes_pls_golite062009
  • binding
    		•  1.32395331736751 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle