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Protein Overview: gi|30259607, gi|...

General Information:
Name(s) found: gi|30264932 [NCBI NR]
gi|30259607 [NCBI NR]
Description(s) found:
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  • gi|30264932|ref|NP_847309.1| glycogen branching enzyme [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259607|gb|AAP28795.1| 1,4-alpha-glucan branching enzyme [Bacillus anthracis str. Ames] [NCBI NR]
  • 1,4-alpha-glucan branching enzyme [Bacillus anthracis str. Sterne]gi|47778366|ref|YP_021776.2| 1,4-alpha-glucan branching enzyme [Bacillus anthracis str. 'Ames Ancestor']gi|30264932|ref|NP_847309.1| 1,4-alpha-glucan branching enzyme [Bacillus anthracis [nrdb_11152004_Chlamydomonas]
  • 1,4-alpha-glucan branching enzyme [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • glycogen branching enzyme [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 645 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycogen biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 1,4-alpha-glucan branching enzyme activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVINCEEVK RDEFHTEKYY ESYNIFGAHI VTEDEMRGVR FTVWAPHAKA MSVVGDFNEW  60
   61 DYEQHKMLQV TEEGIWSLFI PHIEEREIYK YAIETMAGDV IFKADPYAVY AEVRPNTASV 120
  121 VFDIKGYEWN DKNWSRKKKK KSVYKEAMTV YELHFGSWKK KEDGTLYSYR EMAEELIPYV 180
  181 VEHQFTHIEI MPLVEHPYDR SWGYQGTGYY AATSRFGTPH DLMHFVDECH KYGIGVILDW 240
  241 VPGHFCKDAH GLYLFDGTPT YEYKDKDVQE NPVWGTVNFD LGKREVRNFL ISNALFWMRY 300
  301 FHIDGFRVDA VANMLYWNKE GQEQSNEHAV SFLRELNEAV FAEDEDFLMT AEDSTAWPLV 360
  361 TAPTYEGGLG FNYKWNMGWM NDVLKYMECA PEYRKYIHDK MTFSLLYAYS ENFILPLSHD 420
  421 EVVHGKKSLL NKMPGDYWDK FAQLRLLYGY FFTHPGKKLL FMGGEFGQFD EWKDLEDLDW 480
  481 NLHDFEMHRY MHDYFKELIA LYKRSKPLWQ LDHSREGFQW IDANNNEQSI FSFIRQGDKQ 540
  541 EDALVVVCNF TKATYENYKV GVPDFEYYNE VLNSDAEQYG GSGQVNKKRL KTFQEPYHNQ 600
  601 TAHVEITIPP FGVSILRPVK TRKGSKKQDG SKTKVRSNVT SRGKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..645] PSI-BLAST 133.0 1,4-alpha-glucan branching enzyme, N-terminal domain N; 1,4-alpha-glucan branching enzyme; 1,4-alpha-glucan branching enzyme, central domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on glycosyl bonds
    		•  3.87554479203059 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.47174391073813 bayes_pls_golite062009
  • hydrolase activity
    		•  2.08746386980684 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • phosphorylase activity
    		•  0.99159540154441 bayes_pls_golite062009
  • glucosidase activity
    		•  0.766503513427695 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.763360027922833 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.687079660016821 bayes_pls_golite062009
  • sugar binding
    		•  0.52048704356718 bayes_pls_golite062009
  • chitinase activity
    		•  0.500233744020165 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.498330151821515 bayes_pls_golite062009
  • binding
    		•  0.391406996198514 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.31275257729319 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.263065978664289 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  0.0325030313870961 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  0.0325030313870961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle