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Protein Overview: gi|30264703, gi|...

General Information:
Name(s) found: gi|30264703 [NCBI NR]
gi|30259378 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30264703|ref|NP_847080.1| argininosuccinate lyase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259378|gb|AAP28566.1| argininosuccinate lyase [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 462 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: arginine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: argininosuccinate lyase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLWGGRFT EEAEAWVEEF GASISFDQQL VNQDINGSIA HVTMLAKQGI VTKEEAEKIK  60
   61 IGLQYLLEEA KQNKLHFSVE AEDIHLNIEK MLMEKIGEVG GKLHTGRSRN DQVATDMHLY 120
  121 LKEKVEHIIK AIKQLQTVLV HQAENNIETI MPGYTHLQRA QPISFAHHIL AYFWMLERDV 180
  181 NRYEDSLKRI NISPLGAGAL AGTTFPIDRE YSAELLGFNG IYENSLDAVS DRDFILEFLS 240
  241 NSSMLMMHLS RFCEELILWS SQEFQFIEMS DQYATGSSIM PQKKNPDMAE LIRGKTGRVY 300
  301 GNLFSLLTVM KGLPLAYNKD LQEDKEGMFD TVKTVEGCLH IMAGMLETMT VNKEKMGQAV 360
  361 TQDFSNATEI ADYLANKGLP FRQAHEIVGK LVLHCTQKGI YLIDVPLATY KEMSALFEED 420
  421 LYEVLSPYAA VKRRNSAGGT GFEQIEKALE KAKGLTKEAI KN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..462] PSI-BLAST 132.0 Structure determination and refinement at 2.44 A resolution of Argininosuccinate lyase from E. coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • amidine-lyase activity
    		•  3.84281419858187 bayes_pls_golite062009
  • argininosuccinate lyase activity
    		•  3.58328346705456 bayes_pls_golite062009
  • catalytic activity
    		•  2.51282259572665 bayes_pls_golite062009
  • lyase activity
    		•  2.31268471569846 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  2.2046475419807 bayes_pls_golite062009
  • fumarate hydratase activity
    		•  1.8220456742683 bayes_pls_golite062009
  • histidine ammonia-lyase activity
    		•  0.948129236753279 bayes_pls_golite062009
  • binding
    		•  0.616567403608599 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.491229595527877 bayes_pls_golite062009
  • protein binding
    		•  0.110986062813054 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle