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View Structure Prediction Details

Protein: gi|30264703, gi|...
Organism: Bacillus anthracis str. Ames
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264703, gi|....

Description E-value Query
Range		 Subject
Range
gi|98660428 - gi|98660428|dbj|GAA02348.1| unnamed protein product [Pelotomaculum thermopropionicum SI]
 0.0 [1..459] [4..462]
ARLY_NITOC - Argininosuccinate lyase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=argH PE=3 SV=1
gi|207089381 - gi|207089381|gb|EDZ66653.1| argininosuccinate lyase [Nitrosococcus oceani AFC27]
gi|254436270, gi... - gi|254436270|ref|ZP_05049777.1| argininosuccinate lyase [Nitrosococcus oceani AFC27], gi|224409727|r...
 0.0 [3..456] [10..463]
ARLY_BACCZ - Argininosuccinate lyase OS=Bacillus cereus (strain ZK / E33L) GN=argH PE=3 SV=1
 0.0 [1..462] [1..462]
ARLY_BACWK - Argininosuccinate lyase OS=Bacillus weihenstephanensis (strain KBAB4) GN=argH PE=3 SV=1
 0.0 [1..455] [1..455]
ARLY_BACCR - Argininosuccinate lyase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCI...
 0.0 [1..462] [1..462]
ARLY_BACCN - Argininosuccinate lyase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98...
 0.0 [1..462] [1..462]
ARLY_BACC1 - Argininosuccinate lyase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=argH PE=3 SV=1
 0.0 [1..462] [1..462]
ARLY_PSESM - Argininosuccinate lyase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=argH PE=3 SV=1
ARLY_PSESM - Argininosuccinate lyase OS=Pseudomonas syringae pv. tomato GN=argH PE=3 SV=1
 0.0 [2..457] [7..462]
gi|47565043, gi|... - gi|47565043|ref|ZP_00236086.1| argininosuccinate lyase [Bacillus cereus G9241], gi|47557829|gb|EAL16...
 0.0 [1..458] [1..458]
gi|148545463, gi... - gi|82737852|ref|ZP_00900696.1| Argininosuccinate lyase [Pseudomonas putida F1], gi|82715091|gb|EAP50...
 0.0 [2..459] [42..499]

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Predicted Domain #1
Region A:
Residues: [1-462] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLWGGRFT EEAEAWVEEF GASISFDQQL VNQDINGSIA HVTMLAKQGI VTKEEAEKIK  60
   61 IGLQYLLEEA KQNKLHFSVE AEDIHLNIEK MLMEKIGEVG GKLHTGRSRN DQVATDMHLY 120
  121 LKEKVEHIIK AIKQLQTVLV HQAENNIETI MPGYTHLQRA QPISFAHHIL AYFWMLERDV 180
  181 NRYEDSLKRI NISPLGAGAL AGTTFPIDRE YSAELLGFNG IYENSLDAVS DRDFILEFLS 240
  241 NSSMLMMHLS RFCEELILWS SQEFQFIEMS DQYATGSSIM PQKKNPDMAE LIRGKTGRVY 300
  301 GNLFSLLTVM KGLPLAYNKD LQEDKEGMFD TVKTVEGCLH IMAGMLETMT VNKEKMGQAV 360
  361 TQDFSNATEI ADYLANKGLP FRQAHEIVGK LVLHCTQKGI YLIDVPLATY KEMSALFEED 420
  421 LYEVLSPYAA VKRRNSAGGT GFEQIEKALE KAKGLTKEAI KN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 132.0
Match: 1tj7A
Description: Structure determination and refinement at 2.44 A resolution of Argininosuccinate lyase from E. coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
amidine-lyase activity 3.84281419858187 bayes_pls_golite062009
argininosuccinate lyase activity 3.58328346705456 bayes_pls_golite062009
catalytic activity 2.51282259572665 bayes_pls_golite062009
lyase activity 2.31268471569846 bayes_pls_golite062009
carbon-nitrogen lyase activity 2.2046475419807 bayes_pls_golite062009
fumarate hydratase activity 1.8220456742683 bayes_pls_golite062009
histidine ammonia-lyase activity 0.948129236753279 bayes_pls_golite062009
binding 0.616567403608599 bayes_pls_golite062009
ammonia-lyase activity 0.491229595527877 bayes_pls_golite062009
protein binding 0.110986062813054 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle