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Protein Overview: gi|30264255, gi|...

General Information:
Name(s) found: gi|30264255 [NCBI NR]
gi|30258900 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30264255|ref|NP_846632.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258900|gb|AAP28118.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 452 amino acids

    Gene Ontology:
    Cellular Component: exodeoxyribonuclease VII complex [ISSLink to PubMed article]
    Biological Process: DNA catabolic process [ISSLink to PubMed article]
    Molecular Function: exodeoxyribonuclease VII activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKQYLTVTA LTRYIKTKIE YDPHLQSVWL KGEISNFKNH SRGHMYFTLK DENARIAAVM  60
   61 FAGHNRNIKF RPENGMKVLV KGKISVYEAS GSYQIYIQDM QPDGIGNLHL AYEQLKVRLE 120
  121 EEGLFSQVYK KTIPPYAKTI GVITSPTGAA IRDIITTIKR RYPIGNVIVF PVLVQGESAA 180
  181 PSIVQAIRTA NEMEEIDVLI VGRGGGSIEE LWAFNEEMVA RAIFKSEIPI ISAVGHETDF 240
  241 TIADFVADLR APTPTAAAEL AAPNIIELQE KVLQRTLRLQ RAMRELVHKK EEKLQVLQKS 300
  301 YAFRYPRQVY EQKEEQLDRA LEQLVLAKER YIDKKVNQLK QLSFYLEKHH PSQKIMQTKV 360
  361 AVETLQKQLQ REMQTLLQAK EFAFVRAAQK LEALSPLKVM MRGYGLVYDE EKQVLKSVKD 420
  421 VSLGDAVSVQ LQDGILDCSV SGIEERELNN GK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] Pfam 13.744727 No description for PF01336.16 was found. No confident structure predictions are available.
    2 View Details [176..249] deduced N/A No confident structure predictions are available.
    3 View Details [250..452] PSI-BLAST 8.221849 human APP core domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.7871201389646 bayes_pls_golite062009
  • protein binding
    		•  1.17121102134656 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.521010838154847 bayes_pls_golite062009
  • DNA binding
    		•  0.440048609314838 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle