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Protein Overview: gi|30262595, gi|...

General Information:
Name(s) found: gi|30262595 [NCBI NR]
gi|30257227 [NCBI NR]
Description(s) found:
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  • gi|30262595|ref|NP_844972.1| D-alanine--D-alanine ligase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30257227|gb|AAP26458.1| D-alanine--D-alanine ligase [Bacillus anthracis str. Ames] [NCBI NR]
  • D-alanine--D-alanine ligase [Bacillus anthracis str. Sterne]gi|47527903|ref|YP_019252.1| D-alanine--D-alanine ligase [Bacillus anthracis str. 'Ames Ancestor']gi|30262595|ref|NP_844972.1| D-alanine--D-alanine ligase [Bacillus anthracis str. Ames]gi|3025 [nrdb_11152004_Chlamydomonas]
  • D-alanine--D-alanine ligase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • D-alanylalanine synthetase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 304 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: D-alanine-D-alanine ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIGVIMGGV SSEKQVSIMT GNEMIANLDK NKYEIVPITL NEKMDLIEKA KDIDFALLAL  60
   61 HGKYGEDGTV QGTLESLGIP YSGSNMLSSG ICMDKNISKK ILRYEGIETP DWIELTKMED 120
  121 LNFDELDKLG FPLVVKPNSG GSSVGVKIVY DKDELISMLE TVFEWDSEVV IEKYIKGEEI 180
  181 TCSIFDGKQL PIISIRHAAE FFDYNAKYDD ASTIEEVIEL PAELKERVNK ASLACYKALK 240
  241 CSVYARVDMM VKDGIPYVME VNTLPGMTQA SLLPKSADAA GIHYSKLLDM IIETSLRVRK 300
  301 EEGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] PSI-BLAST 57.0 COMPLEX OF D-ALA:D-ALA LIGASE WITH ADP AND A PHOSPHORYL PHOSPHONATE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.87139587563481 bayes_pls_golite062009
  • D-alanine-D-alanine ligase activity
    		•  1.88295354007688 bayes_pls_golite062009
  • ligase activity
    		•  1.70071261805297 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  1.43012336035246 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.463643664297841 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle