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Protein Overview: gi|30262418, gi|...

General Information:
Name(s) found: gi|30262418 [NCBI NR]
gi|30257049 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30262418|ref|NP_844795.1| protoporphyrinogen oxidase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30257049|gb|AAP26281.1| protoporphyrinogen oxidase [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: porphyrin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: oxygen-dependent protoporphyrinogen oxidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVVVIGGG ITGLSTMFYL EKFKKDNNID LNLILVEKEE YLGGKIHSVE EKDFIMESGA  60
   61 DSIVARNEHV MPLVKDLNLE GEMVYNETGI SYIYSDNTLH PIPSDTIFGI PMSVESLFSS 120
  121 TLVSTKGKIV ALKDFITKNK EFTKDTSLSL FLESFLGKEL VERQIAPVLS GVYSGKLNEL 180
  181 TMASTLPYLL DYKNKYGSII KGFEENKKQF QSAGNKKFVS FKGGLSTIID RLEEMLTETV 240
  241 VKKGAVTTAV SKQGDRYEIS FANHDSIHAD YVVLAAPHDI AETLLQSNEL NEQFHTFKNS 300
  301 SLVSIYLGFD ILDEQLPADG TGFIVTENSD LHCDACTWTS RKWKHTSGKQ KLLVRMFYKS 360
  361 TNPVYETIKN YSEEELVRVA LYDIEKSLGI KGEPEVVEVT NWKDLMPKYH LEHNQALQTL 420
  421 QEKMMNLYPN IYLAGASYYG VGIGACIGNG KNIANEIIAT LNEPSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..466] PSI-BLAST 50.0 Crystal Structure of Protoporphyrinogen IX Oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  5.26950448055146 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.51724585323847 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  1.3578742399915 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.20561532241252 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.07656675953489 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.945028138297487 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.705416796630992 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.639301957614768 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.521196797955847 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.377084832476769 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  0.31749398611457 bayes_pls_golite062009
  • ferrous iron binding
    		•  0.166200528859874 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle