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Protein Overview: gi|30256793, gi|...

General Information:
Name(s) found: gi|30262167 [NCBI NR]
gi|30256793 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30262167|ref|NP_844544.1| nitrite reductase [NAD(P)H], large subunit [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30256793|gb|AAP26030.1| nitrite reductase [NAD(P)H], large subunit [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 801 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nitrate assimilation [ISSLink to PubMed article]
    Molecular Function: nitrite reductase (cytochrome, ammonia-forming) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRLVMIGN GMAGIRCMEE ILKHDCDSYE ITIFGDEPHP NYNRIMLSHV LQGKTNIQDI  60
   61 IMNEYSWYEE NEITLYTNER VQSIDREEKV IMTEKNRTLT YDKLIIATGS SAFILPVEGS 120
  121 TLPGVTGFRT IEDTQFMMDT AKEKKKAVVI GGGLLGLEAA RGLIDLGMDV HVVHLMPSLM 180
  181 EQQLDTKAAS LLREDLEAQG MKFLMEKKTV KILGTNHVEG IQFEDGEVVD CDLIVMAVGI 240
  241 RPNTQIARDA GLIVNRGIVV NDYMLTNDES IYAVGECAEH DGIAYGLVAP LYEQGAILAK 300
  301 HISNLQTDGY SGSIVGTQLK VAGCDLFSAG QIYEDDQTKA ISIFNECKRS YKKVLIRDNK 360
  361 VVGIVLYGDT ADGTRLFSML KKEEDIQEYT PASILHKAGE ESELDVATMS ADDTICGCNG 420
  421 VTKGTIVHAI LEQELTTFEE VKGCTKAAGS CGKCRPLVEQ VLSHTLGDAF DASAQSAGMC 480
  481 GCTPLSRDEV VAAIHEKGLK SPKEVRNVLG FVHEDGCSKC RPALNYYLRM AIPEEYEDDK 540
  541 ASRFVNERMN GNIQHDGTFS VIPRMYGGVT TADDLMKIAE VAKKYDVPLV KITGASRIGL 600
  601 YGVKKQDLPN VWADLNMTSG YAYSKSLRNV KSCVGSRFCR FGTKDSLGLG MLLEQSLEMV 660
  661 DTPHKMKMGV TGCPRNCAEV LTKDFGVVCV ENGYQLYIGG NGGTEVREAD FVMIVPTEDD 720
  721 VLHIATAYMQ YYRETGIYGE RTAYWTERLD FDHIKEILQD ANMVTKLNER FQTARGTYKE 780
  781 AWGQALETKS LKAMYEVETV K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..323] PSI-BLAST 55.522879 Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida
    2 View Details [324..480] FFAS03 2.08 No description for 2hu9A was found.
    3 View Details [481..801] PSI-BLAST 75.154902 SULFITE REDUCTASE STRUCTURE AT 1.6 ANGSTROM RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  3.16996423124828 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.84234192551392 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.79314033427747 bayes_pls_golite062009
  • catalytic activity
    		•  1.56773888754354 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.52244283583973 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.7514316327505 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • oxidoreductase activity, acting on sulfur group of donors
    		•  0.882506788158397 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.881751421934527 bayes_pls_golite062009
  • catalytic activity
    		•  0.767627914425245 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle