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Protein Overview: gi|30261833, gi|...

General Information:
Name(s) found: gi|30261833 [NCBI NR]
gi|30256061 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30261833|ref|NP_844210.1| D-serine dehydratase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30256061|gb|AAP25696.1| D-serine dehydratase [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 446 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular amino acid metabolic process [ISSLink to PubMed article]
    Molecular Function: D-serine ammonia-lyase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEIEKLKEE YPLLNKLIEI EEVFWVNPNM EKYETAIKDS PLSEENVKDA EERLKRFASY  60
   61 IAKVFPETKD TGGIIESPLV KIPSMKQSLE KNYEQPILGE LLLKCDSHLP ISGSIKARGG 120
  121 IYEVLKHAEQ LALQQGMLTE EDDYSILDSD TCREFFATYS IAVGSTGNLG LSIGIMSAKL 180
  181 GFNVTVHMSA DAKQWKKDLL RSKGVNVIEY EADYSKAVEE GRRQADADPS CYFVDDENSH 240
  241 DLFLGYAVAA SRLQKQLEEL EIIVDEEHPL FVYLPCGVGG GPGGVAFGLK LLYKDNVHCF 300
  301 FAEPTHSPCM LIGLMTGLHD KIAVQDIGID NVTDADGLAV GRPSGFVGKT MEPFLSGNYT 360
  361 VSDEELYRLL KELADTENIY LEPSALAGMI GPVKVCKEDA YLQEQQLMEK MKKGTHIVWG 420
  421 TGGSMVPEDV MNGYYKTGEA LTILEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..446] PSI-BLAST 65.221849 Cystathionine beta-synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cysteine synthase activity
    		•  3.05516621034881 bayes_pls_golite062009
  • catalytic activity
    		•  2.76038225023173 bayes_pls_golite062009
  • lyase activity
    		•  2.54165185299539 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.52790731142158 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.943946746392831 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  0.8463142805916 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
    		•  0.57533596285038 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  0.44169275450925 bayes_pls_golite062009
  • threonine synthase activity
    		•  0.19129755094699 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle