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Protein Overview: gi|30255285, gi|...

General Information:
Name(s) found: gi|30261431 [NCBI NR]
gi|30255285 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30261431|ref|NP_843808.1| internalin, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255285|gb|AAP25294.1| internalin, putative [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 542 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: entry into host cell [ISSLink to PubMed article]
    Molecular Function: receptor binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLNTNEILD YSALKYMPNL KSLTVANAKI KDPSFFANLK QLNHLALRGN EFSDVTPLVK  60
   61 MDHLDSLDLS NNKITNVAPL IEMKNVKSLY LSGNQIEDVT ALAKMEQLDY LNLANNKITN 120
  121 VAPLSALKNV TYLTLAGNQI EDIKPLYSLP LTDLVLTRNK VKDLSGIEQM KQLEELWIGK 180
  181 NEIKDVTPLS KMTQLKQLHL PNNELKDITP LSSLVNLQKL DLEANYISDL TPASNLKKLV 240
  241 FLSFVANEIR DVRPVIELSK TAYINVQNQK VFLEETEVNK EVKVPIYEKD GKISTKIRLK 300
  301 GEGGTYSNDA VKWSTPGEKV YEFGVKDPFA DTGIFFTGSV IQNVVESKAD NTSKEDNTSK 360
  361 EDAKVEVVEF KDVPKGHWSE EAIHYLAKEN IFKGYGNGQF GFGDSITRGQ VASLVQRYLK 420
  421 LENKVEQKER FTDTKGHMFE QDIATVAQAG IMQGDGTGEF RPDGVLTRYE MSVVLYKVFQ 480
  481 LKEDGNNKVN FKDVPTGHWA EGYVKALVDN NISKGDGKER FLGDDFVTRE QYAQFLYNAI 540
  541 TK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..366] PSI-BLAST 49.522879 No description for 2omuA was found.
    2 View Details [367..542] MSA 12.126992 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.599328380025667 bayes_pls_golite062009
  • receptor activity
    		•  0.534098080799865 bayes_pls_golite062009
  • protein binding
    		•  0.414941881933838 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.0356911083104122 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle