YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30255251, gi|...

General Information:
Name(s) found: gi|30261397 [NCBI NR]
gi|30255251 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|30261397|ref|NP_843774.1| glycolate oxidase, iron-sulfur subunit, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255251|gb|AAP25260.1| glycolate oxidase, iron-sulfur subunit, putative [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [ISSLink to PubMed article]
    Molecular Function: glycolate oxidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLNKENIQ KEFKERLSED ELLNCMRCGF CLPTCPTYIQ SGYKESHSPR GRIALMKAVV  60
   61 DGLIEPDEDV ENTLNVCLGC RACEPVCPSG VNYGHLLEEA RDIINQNKKF SMPVRAVRKV 120
  121 VFEELFPHQN RMRTLTGLIG FYQRSGLQTI THKTGIMKLF PETLATMDLV LPKVPKMKAM 180
  181 KDRPTFLPAE STKKKQVAFF TGCLMDTMFL ETNNATMKLL QLAGCDIVIP KTQSCCGALH 240
  241 GHAGEKSGAK ELAKRNIKAF EDLNIDYIIT NAGGCGAYLV DYDYLLKDDP QWAGRAKQFV 300
  301 SKIKDITAIL VELDFHKRND LRLTPQIITY QDSCHLRNVM RTSSEPRMLL EAIQGATYRE 360
  361 MKDADRCCGS AGIYNIVHSE LSMEFLDYKM DRVHETDATT IVTANPGCLL QMKLGIEREG 420
  421 LSHKMRGIHI VDLLLEAIET NS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] PSI-BLAST 26.0 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I; Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI; Pyruvate-ferredoxin oxidoreductase, PFOR, domain II; Pyruvate-ferredoxin oxidoreductase, PFOR, domain III; Pyruvate-ferredoxin oxidoreductase, PFOR, domain V
    2 View Details [230..315] Pfam 15.431798 No description for PF02754.7 was found. No confident structure predictions are available.
    3 View Details [316..442] Pfam 14.568636 No description for PF02754.7 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • formate dehydrogenase activity
    		•  4.7946737640663 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  3.13953145151561 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  2.76338281383262 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  2.70037803782769 bayes_pls_golite062009
  • electron carrier activity
    		•  2.45164586846912 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.09041948600744 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.80621486978907 bayes_pls_golite062009
  • 4 iron, 4 sulfur cluster binding
    		•  1.5619384041388 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  1.48723437664337 bayes_pls_golite062009
  • metal cluster binding
    		•  1.48723437664337 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.660370448422897 bayes_pls_golite062009
  • catalytic activity
    		•  0.488483980994331 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  0.0827182678048914 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle