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Protein Overview: gi|30261151, gi|...

General Information:
Name(s) found: gi|30261151 [NCBI NR]
gi|30254765 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|30261151|ref|NP_843528.1| glycerol-3-phosphate dehydrogenase, aerobic [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30254765|gb|AAP25014.1| glycerol-3-phosphate dehydrogenase, aerobic [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycerol metabolic process [ISSLink to PubMed article]
    Molecular Function: glycerol-3-phosphate dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSSKQRKD VLNGVNKQEL DVIVIGGGIT GSGIALDGAT RGLSTIVFEM QDFAAGTSSR  60
   61 STKLVHGGLR YLKQLEVKMV AEVGKERAIV YENGPHVTTP EWMLLPFHTG GTFGSFSTSI 120
  121 GLRVYDFLAG VKRSERRKMF NREETLKKEP LVKQEGLKGG GYYVEYRTDD ARLTIEVMKE 180
  181 AIEHGAKAVN YAKVDGFLYK DGKVCGVRVI DLLDGEVYEV YGKKIVNAAG PWVDTLREKD 240
  241 NSKKGKVLQL SKGVHLVIDQ KRFPLGQAIY FDTPDKRMVF AIPRGGKTYV GTTDTFYDKD 300
  301 AAVPQMTTED RTYIINAINY MFPSVKITEK DIESSWAGVR PLIYEEGKSA SEISRKDEIW 360
  361 TSESGLITIA GGKLTGYRKM AEMVVDYVTN LLQKEGHSAY PKSSTKHMPI SGGHVDGSKG 420
  421 LPAFIAKKAG EGTKYGLTTA QAEEFAKFYG SNVDVLFDLA KKHKDEAKEY NMPLDVLIPL 480
  481 VYAMDYEMTA KPVDFFVRRR GAVFFNIHWV YEWKEAVINY MAAKLGWSKE EQMKYTAELE 540
  541 KALTDAVIPV DQQEHAAALA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..459] PSI-BLAST 30.39794 Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with acetate
    2 View Details [460..560] deduced N/A Confident ab initio structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor
    		•  2.25002926602325 bayes_pls_golite062009
  • electron-transferring-flavoprotein dehydrogenase activity
    		•  1.55451764082771 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.52511707514198 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.45104542724719 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.35744482443829 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.18990628739838 bayes_pls_golite062009
  • antioxidant activity
    		•  1.12347155061135 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  1.08975609376408 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.985237795107607 bayes_pls_golite062009
  • binding
    		•  0.850689563354756 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.643810447309487 bayes_pls_golite062009
  • protein binding
    		•  0.370064403093958 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  0.23045510393832 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.162130833238942 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.130601418359425 bayes_pls_golite062009
  • amine oxidase activity
    		•  0.0576694782267841 bayes_pls_golite062009
  • DNA binding
    		•  0.022476246602636 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.49

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle