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Protein Overview: gi|30260643, gi|...

General Information:
Name(s) found: gi|30260643 [NCBI NR]
gi|30254011 [NCBI NR]
Description(s) found:
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  • gi|30260643|ref|NP_843020.1| phage minor structural protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30254011|gb|AAP24506.1| phage minor structural protein [Bacillus phage lambda Ba01] [NCBI NR]
  • phage minor structural protein [Bacillus anthracis str. Sterne]gi|47525751|ref|YP_017100.1| phage minor structural protein [Bacillus anthracis str. 'Ames Ancestor']gi|30260643|ref|NP_843020.1| phage minor structural protein [Bacillus anthracis str. Ames [nrdb_11152004_Chlamydomonas]
  • phage minor structural protein [Bacillus anthracis phage lambda Ba01] [nr-271106-contam.fasta]
  • phage minor structural protein [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 544 amino acids

    Gene Ontology:
    Cellular Component: virion [ISSLink to PubMed article]
    Biological Process: viral reproduction [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHIKLYDKQ LQLKAYLENA FKIKYSPPLN ELWTAGFSLP FTDPKREEIE TFDYVEIFDN  60
   61 GKRIGLFRIM DSEEEREVSQ KIITYDCEHV LSTLMDSVLF GYHERINLTT RENIEYLLSK 120
  121 QRIKHWKLGQ CDFVKYFQYS WENEDTILGP IYSIAKPFDE KFQWTWDDTS YPWTLNLVKY 180
  181 SDEITGELRY RKNMKGIKRK VEAKDVMTRI YPLGYGEGVN QLNIKSVNNG LPYIDAPDFV 240
  241 RELQDGFDYI WVDRRFEDPK TLYASAKAML LKACMPKVTY EIDAIDYELI DPYKIEKYET 300
  301 GKLVRLYDED FNISVDLRVM DRSKDDVTGN PLDVKLVLEN KVTDIGTIQA DIEKRQKVNE 360
  361 VYSQGTTNID SQPFQDNCDP DHPAIIRFQI PNDVKNVNQL ILTFETLRFR AYERAIKGGG 420
  421 AVVASTSAGG ANVSSTSSGG GTVGSTSSGG SSVQASSSGG GTVKASSSGG DHVHKMFHGG 480
  481 GIVPAEPSTI GLYTAFSDPG RNTSASFYAK GTGSSFYTYG SSGNHTHDIS IPNHTHSINI 540
  541 NHKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] FFAS03 1.92 Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu
    2 View Details [342..544] PSI-BLAST 20.09691 Fibrinogen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.715651839389854 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle