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Protein Overview: gi|30253920, gi|...

General Information:
Name(s) found: gi|30260552 [NCBI NR]
gi|30253920 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30260552|ref|NP_842929.1| chitinase B [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30253920|gb|AAP24415.1| chitinase B [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 674 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: chitin catabolic process [ISSLink to PubMed article]
    Molecular Function: chitinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSKKFTLLL LSLLLFLPLF LTNFITPNVV LADSQKQDQK IVGYFPSWGI YGRNYQVADI  60
   61 DASKLTHLNY AFADICWNGK HGNPSTHPDN PNKQTWNCKE SGVPLQNKEV PNGTLVLGEP 120
  121 WADVTKSYPG SGTTWEDCDK YARCGNFGEL KRLKAKYPHL KTIISVGGWT WSNRFSDMAA 180
  181 DEKTRKVFAD STVDFLREYG FDGVDLDWEY PGVETIPGGS YRPEDKQNFT LLLQDVRNAL 240
  241 TKAGAEDGKQ YLLTIASGAS QRYADHTELK KISQILDWIN IMTYDFHGGW EATSNHNAAL 300
  301 YKDPNDPAAD TKFYVDGAID IYTNEGVPAD KLVLGVPFYG RGWKSCGKEN NGQYQPCKPG 360
  361 SDGKLASKGT WDDYSTGDTG VYDYGDLAAN YVNKNGFVRG WNDVAKVPYL YNATTGTFIS 420
  421 YDDNESMKYK TDYIKTKGLS GAMFWELSGD CRTSPKYSCS GPKLLDTLVK ELLGGPITQK 480
  481 DIEPPTNVKN IAVTNKNSNS VQLNWTASTD NVGVTEYEIT AGEEKWSTTT NSIAIKNLKP 540
  541 NTEYTFSILA KDAAGNKSQP TSILVKTDDA NTTPPGGNSN ATFSVTSNWG SGYNFSIVIK 600
  601 NSGTTPIKNW KLEFDYNGNL TQVWDSKISS KINNHYVITN AGWNGEIPPG GSITIGGAGT 660
  661 GTPAELVNAS ISEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 78.0 Chitinase A1
    2 View Details [87..576] PSI-BLAST 46.09691 Chitinase B, C-terminal domain; Chitinase B, catalytic domain; Chitinase B
    3 View Details [577..674] PSI-BLAST 12.0 SOLUTION STRUCTURE OF A CELLULOSE BINDING DOMAIN FROM CELLULOMONAS FIMI BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • chitinase activity
    		•  6.40555694403866 bayes_pls_golite062009
  • receptor binding
    		•  2.49274459751868 bayes_pls_golite062009
  • growth factor activity
    		•  2.4208679297225 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.91170236789651 bayes_pls_golite062009
  • amylase activity
    		•  1.38959979746158 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  1.34796838721403 bayes_pls_golite062009
  • chitin binding
    		•  1.29046765706168 bayes_pls_golite062009
  • binding
    		•  0.931465888895274 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.83219070974164 bayes_pls_golite062009
  • glucosidase activity
    		•  0.766503513427695 bayes_pls_golite062009
  • pattern binding
    		•  0.629401292223251 bayes_pls_golite062009
  • catalytic activity
    		•  0.534516847146079 bayes_pls_golite062009
  • protein binding
    		•  0.41522498233974 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.21148675734804 bayes_pls_golite062009
  • hydrolase activity
    		•  0.178746202646272 bayes_pls_golite062009
    3
    Term Confidence Notes
  • pattern binding
    		•  2.27215563583973 bayes_pls_golite062009
  • binding
    		•  1.34949978791263 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.30518726696745 bayes_pls_golite062009
  • carbohydrate binding
    		•  1.22734683278419 bayes_pls_golite062009
  • protein binding
    		•  0.382621269105676 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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