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Protein Overview: gi|46450224, gi|...

General Information:
Name(s) found: gi|46580804 [NCBI NR]
gi|46450224 [NCBI NR]
Description(s) found:
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  • gi|46580804|ref|YP_011612.1| hydrogenase, putative [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [NCBI NR]
  • gi|46450224|gb|AAS96872.1| hydrogenase, putative [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [NCBI NR]
  • hydrogenase, putative [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough]gi|46450224|gb|AAS96872.1| hydrogenase, putative [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [nrdb_11152004_Chlamydomonas]
  • hydrogenase, putative [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [nr-271106-contam.fasta]
    • Organism: Desulfovibrio vulgaris str. Hildenborough
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLGSGFTD NPYLPDVATV LETVQETPAI KTLRVRIDDA ARMDAFRFNP GQVGQLSLFG  60
   61 VGESTFVINS PPTRMDYLQF SIMRAGEVTA ALHGLKPGDK VGVRAPLGNW FPFEDMRGKD 120
  121 IVFVGGGIGM APLRTLLLYM LDNRADYGNI TLLYGARTPG DMAFRDDVQD WLGRSDMNTT 180
  181 LTVDQAPDDW PHRAGLIPHV LLDLAPSNAN SVAVLCGPPI MIKFTVEALK KLHFADEQII 240
  241 TTLERRMKCG IGICGRCNIG TKYVCVDGPV FSYAELKELP NEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 47.69897 CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE FROM PIG LIVER AT 2.4 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.82418089257266 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.06930052685144 bayes_pls_golite062009
  • transferase activity
    		•  0.132410979371312 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle