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Protein Overview: gi|46580017, gi|...

General Information:
Name(s) found: gi|46580017 [NCBI NR]
gi|46449433 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|46580017|ref|YP_010825.1| TrkA family potassium uptake protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [NCBI NR]
  • gi|46449433|gb|AAS96084.1| potassium uptake protein, TrkA family [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] [NCBI NR]
    • Organism: Desulfovibrio vulgaris str. Hildenborough
    Length: 350 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTMRGRLPL STRIYRLRNR FGSVWPLLIG QVSLLCVFIC ATLGYMYIEG WSAFDSFYMV  60
   61 VITLSTIGFG EVHPLSSQGR LLTTLVVFAG VGNFAFIIGA FSQLLVDGKL YRYMGRRRVL 120
  121 KAIAKLRDHC IVCGYGRIGS VVAKELMEEG VALVVIENDP AMIEALETEG ILHLAGDATN 180
  181 DELLQAAGIE RARALVAALS LDSANVYVVL SAHQINPSMT IVARASEPSH IGKLKLAGAD 240
  241 RVFLPHHLGG LRMAQSILRP TVTSFIELAH TRSDLSIQME ELEIGDDSVL VGKTLIESGI 300
  301 RPQYNLIIIG VKRPDGTMHF NPESTYTLQA RDTLIAVGFP ENFKQFQEIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 35.39794 Potassium channel-related protein MthK

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • inward rectifier potassium channel activity
    		•  2.81500823121833 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.14277756574473 bayes_pls_golite062009
  • catalytic activity
    		•  1.03099072397093 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.94135881928576 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.892063888939586 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.697182336588227 bayes_pls_golite062009
  • potassium ion transmembrane transporter activity
    		•  0.613422790701159 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.579753312473772 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  0.50675258782641 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  0.50675258782641 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.409257304074437 bayes_pls_golite062009
  • potassium channel activity
    		•  0.175535409866419 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.0910712778990327 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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