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Protein Overview: RNH2_PARUW

General Information:
Name(s) found: RNH2_PARUW [Swiss-Prot]
Description(s) found:
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  • gi|81627372|sp|Q6MDG7.1|RNH2_PARUW RecName: Full=Ribonuclease HII; Short=RNase HII [NCBI NR]
  • gi|46446292|ref|YP_007657.1| ribonuclease HII [Candidatus Protochlamydia amoebophila UWE25] [NCBI NR]
  • gi|46399933|emb|CAF23382.1| putative ribonuclease HII [Candidatus Protochlamydia amoebophila UWE25] [NCBI NR]
  • Ribonuclease HII OS=Protochlamydia amoebophila (strain UWE25) GN=rnhB PE=3 SV=1 [Swiss-Prot]
  • putative ribonuclease HII [Parachlamydia sp. UWE25]gi|46399933|emb|CAF23382.1| putative ribonuclease HII [Parachlamydia sp. UWE25] [nrdb_11152004_Chlamydomonas]
  • ribonuclease HII [Candidatus Protochlamydia amoebophila UWE25] [nr-271106-contam.fasta]
  • Ribonuclease HII (RNase HII) [nr-271106-contam.fasta]
  • putative ribonuclease HII [Candidatus Protochlamydia amoebophila UWE25] [nr-271106-contam.fasta]
    • Organism: Candidatus Protochlamydia amoebophila UWE25
    Length: 222 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDLISTEEL TRLEHMIVYE KRAFSQGYQL IAGIDEAGRG PLAGPVVAAA CILPKGLLVP  60
   61 QINDSKKLSP KVRERLFERL TTDSAVRYGI GIIGQAEIDR VNIYQATILA MLMAIQQLPV 120
  121 TPDYVLVDGM NLPHPDLPCL KIIKGDQLSQ SIAAASIIAK ETRDRLMCQY HREWPGYGFN 180
  181 QHKGYATELH LEALFKQGPC PIHRRSFDPI KSMLEVEIAD DF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222] PSI-BLAST 61.522879 Crystal structure of Ribonuclease HII (EC 3.1.26.4) (RNase HII) (tm0915) from THERMOTOGA MARITIMA at 1.74 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribonuclease activity
    		•  3.91517707500372 bayes_pls_golite062009
  • endoribonuclease activity
    		•  3.00008907756136 bayes_pls_golite062009
  • ribonuclease H activity
    		•  2.37346218921366 bayes_pls_golite062009
  • hydrolase activity
    		•  2.30893115816458 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  2.26022264830742 bayes_pls_golite062009
  • nuclease activity
    		•  1.81796593394339 bayes_pls_golite062009
  • endonuclease activity
    		•  1.79009816048707 bayes_pls_golite062009
  • catalytic activity
    		•  1.62277843225829 bayes_pls_golite062009
  • exoribonuclease activity
    		•  1.48827607538468 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  1.34153791988846 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  0.8085201347205 bayes_pls_golite062009
  • exonuclease activity
    		•  0.39213900591465 bayes_pls_golite062009
  • endoribonuclease activity, producing 5'-phosphomonoesters
    		•  0.13187450705887 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle