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Protein Overview: RNH_GEOSL

General Information:
Name(s) found: RNH_GEOSL [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Ribonuclease H OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=rnhA PE=3 SV=1 [Swiss-Prot]
    • Organism: Geobacter sulfurreducens PCA
    Length: 149 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA catabolic process [ISSLink to PubMed article]
    Molecular Function: ribonuclease H activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEVEVFCD GACSGNPGVG GYGAILRYGS AEKELSGADG DTTNNRMELT AAIRALEALS  60
   61 RPCAVTITTD SQYLVKGMTE WLSGWVRRGW VNSKKEPVLN RDLWERLREL TGKHQVRWVW 120
  121 VRGHNGHPEN ERCDALARRA IDAYRNERR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 42.0 STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribonuclease activity
    		•  3.91517707500372 bayes_pls_golite062009
  • endoribonuclease activity
    		•  3.00008907756136 bayes_pls_golite062009
  • ribonuclease H activity
    		•  2.37346218921366 bayes_pls_golite062009
  • hydrolase activity
    		•  2.30893115816458 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  2.26022264830742 bayes_pls_golite062009
  • nuclease activity
    		•  1.81796593394339 bayes_pls_golite062009
  • endonuclease activity
    		•  1.79009816048707 bayes_pls_golite062009
  • catalytic activity
    		•  1.62277843225829 bayes_pls_golite062009
  • exoribonuclease activity
    		•  1.48827607538468 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  1.34153791988846 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  0.8085201347205 bayes_pls_golite062009
  • exonuclease activity
    		•  0.39213900591465 bayes_pls_golite062009
  • endoribonuclease activity, producing 5'-phosphomonoesters
    		•  0.13187450705887 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle