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Protein Overview: gi|39983960, gi|...

General Information:
Name(s) found: gi|39997070 [NCBI NR]
gi|39983960 [NCBI NR]
Description(s) found:
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  • gi|39997070|ref|NP_953021.1| acylneuraminate cytidylyltransferase, putative [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39983960|gb|AAR35348.1| acylneuraminate cytidylyltransferase, putative [Geobacter sulfurreducens PCA] [NCBI NR]
  • acylneuraminate cytidylyltransferase, putative [Geobacter sulfurreducens PCA]gi|39983960|gb|AAR35348.1| acylneuraminate cytidylyltransferase, putative [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • acylneuraminate cytidylyltransferase, putative [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: polysaccharide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: N-acylneuraminate cytidylyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDACIAVIP ARGGSKRVPG KNIKPLMGKP LIAYTVEAAA DSGLFERIVV STDCQEIAEV  60
   61 AQRHGAEVPF LREASLADDI TPVSAATVDM LVKLDPDGST YGFVCQMMPN CPLKTSADVR 120
  121 DSHRQFLESG ADSQLSVVRY GWQNPWWAMR RDDSFRLDPL FREAMTQRSQ DLPELFCPTG 180
  181 AIWWAKADVL RREGTYHIPA KTGWEIPWQR GLDIDTYDDW DMAEILFRLD SAGGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] PSI-BLAST 50.69897 RmlA (RfbA)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.25720704697246 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  2.04393180556087 bayes_pls_golite062009
  • transferase activity
    		•  1.67251862595728 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  1.51711005399931 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  1.46439247968206 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  1.21894113759929 bayes_pls_golite062009
  • 3-deoxy-manno-octulosonate cytidylyltransferase activity
    		•  0.83115346830439 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.696745721981411 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.67147527259372 bayes_pls_golite062009
  • uridylyltransferase activity
    		•  0.54930147038803 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  0.48277064848483 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  0.38929738612511 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.280335197569099 bayes_pls_golite062009
  • glucose-1-phosphate thymidylyltransferase activity
    		•  0.204810937394121 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  0.14847697203788 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  0.10541627748542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle