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Protein Overview: gi|39996810, gi|...

General Information:
Name(s) found: gi|39996810 [NCBI NR]
gi|39983698 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39996810|ref|NP_952761.1| integrative genetic element Gsu5, resolvase [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39983698|gb|AAR35088.1| integrative genetic element Gsu5, resolvase [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 190 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA recombination [ISSLink to PubMed article]
    Molecular Function: site-specific recombinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMIGYARVS TEDQDLTAQV KQLTEAGCDR LYREKVSGVK RDRPELVAML DYVREGDVVV  60
   61 VCKLDRIARS TAHLLEITET LERKGVAFRV LNLNLDTTTP TGKLMLTMLG AIATFEREMM 120
  121 LERQREGIAT AKAEGRYTGR KATAKAKAGE VLSLIAQGKG KQTVADELGI GVASVYRIIQ 180
  181 EHKGSVGNAC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] PSI-BLAST 39.39794 gamma,delta resolvase (C-terminal domain); gamma,delta resolvase, catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • site-specific recombinase activity
    		•  3.0240363733074 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.76956337706487 bayes_pls_golite062009
  • DNA binding
    		•  1.58100039759954 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.46839493313894 bayes_pls_golite062009
  • catalytic activity
    		•  1.20658247466773 bayes_pls_golite062009
  • transcription factor activity
    		•  1.0707787742149 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle