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Protein Overview: gi|39983450, gi|...

General Information:
Name(s) found: gi|39996569 [NCBI NR]
gi|39983450 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|39996569|ref|NP_952520.1| 2-oxoglutarate ferredoxin oxidoreductase subunit beta [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39983450|gb|AAR34843.1| keto/oxoacid ferredoxin oxidoreductase, beta subunit [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fermentation [ISSLink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on iron-sulfur proteins as donors [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFNYEKYIR PGKLPHIWCP GCGHGIVMKG LIRAMDTLGL EKNNTAIVSG IGCASRLPGY  60
   61 MDCCTLHTAH GRAAAFATGV KLSKPEMTVF CVGGDGDGVA IGGNHFIHAC RRNIDMTYIL 120
  121 MNNKIYGMTG GQFSPATPHM AKASTTPYGN PDPSFDIAKL AIGAGATFVA RGTAFHANQI 180
  181 DKLIVEAVQH KGMSVVEILD DCPTCFGRRN KYRSVVEMMN HLKEVAVPVK AAEKMTPEQL 240
  241 QGKVLTGVLY KEDKPEYCEE YRKVIERAQG GAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 34.221849 E1-beta subunit of pyruvate dehydrogenase (PP module)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.62581591393304 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.76278237247276 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  1.33446932713773 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle