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Protein Overview: gi|39983140, gi|...

General Information:
Name(s) found: gi|39996260 [NCBI NR]
gi|39983140 [NCBI NR]
Description(s) found:
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  • gi|39996260|ref|NP_952211.1| superoxide dismutase [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39983140|gb|AAR34534.1| superoxide dismutase [Geobacter sulfurreducens PCA] [NCBI NR]
  • superoxide dismutase [Geobacter sulfurreducens PCA]gi|39983140|gb|AAR34534.1| superoxide dismutase [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • superoxide dismutase [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 192 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: removal of superoxide radicals [ISSLink to PubMed article]
    Molecular Function: metal ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYEAKDYSK LIGMAGFSEA LLKNHFTLYQ GYVTNTNKVL DILAKMLADG ATATPEYAEL  60
   61 KRRLGWEFNG MRLHEFYFEN LGGNGAIDQA GKLAAKIVAD FGSYEAWEKD FRATGAMRGI 120
  121 GWAVLYQDSA TGKLINFWVN EHDVAHPAGC TPILIMDVFE HAFMLDYGLK RPDYIEAFFK 180
  181 NIDWKAAEAR LK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] PSI-BLAST 76.221849 Mn superoxide dismutase (MnSOD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • superoxide dismutase activity
    		•  5.27425026237528 bayes_pls_golite062009
  • oxidoreductase activity, acting on superoxide radicals as acceptor
    		•  5.27425026237528 bayes_pls_golite062009
  • catalytic activity
    		•  0.760929162716404 bayes_pls_golite062009
  • binding
    		•  0.395331369608722 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle