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Protein Overview: gi|39995761, gi|...

General Information:
Name(s) found: gi|39995761 [NCBI NR]
gi|39982525 [NCBI NR]
Description(s) found:
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  • gi|39995761|ref|NP_951712.1| RNA polymerase sigma-32 factor [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982525|gb|AAR33985.1| RNA polymerase sigma-32 factor [Geobacter sulfurreducens PCA] [NCBI NR]
  • RNA polymerase sigma-32 factor [Geobacter sulfurreducens PCA]gi|39982525|gb|AAR33985.1| RNA polymerase sigma-32 factor [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • RNA polymerase sigma-32 factor [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transcription initiation [ISSLink to PubMed article]
    Molecular Function: sigma factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSLPVVAD SLTVYLREIR KFPVLTPEEE YRFAVKFYED KDLEAAHSLI TSNLRFVVKI  60
   61 AAEYRSYGLK MLDLIQEGNV GLMMAVRKFN PYKGIRLISY AVWWIRAYIQ NHIISAWSLL 120
  121 KIGTTQAQKK LFFKLNQAKN AIKGLTGTDD IEATATSLHV KESEVLEMDQ RMRGDFYLDA 180
  181 EIKNGDGLTI LETLADERQN QEDTLAELQE SELLKQHIAG ALGKLNEKER FIVEQRVTAD 240
  241 TPLTLQEIAD RFSISRERVR QIEEAALRKI KSYLIPIIAE TRPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] PSI-BLAST 45.0 DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle