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Protein Overview: SYGA_GEOSL

General Information:
Name(s) found: SYGA_GEOSL [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Glycine--tRNA ligase alpha subunit OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=glyQ PE=3 SV=1 [Swiss-Prot]
    • Organism: Geobacter sulfurreducens PCA
    Length: 292 amino acids

    Gene Ontology:
    Cellular Component: glycine-tRNA ligase complex [ISSLink to PubMed article]
    Biological Process: glycyl-tRNA aminoacylation [ISSLink to PubMed article]
    Molecular Function: glycine-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFQDLILAL QGYWAQQGCV IQQPYDTEKG AGTFNPATFL RVLGPEPWNV AYVEPSRRPT  60
   61 DGRYGENPNR LQHYYQFQVI MKPSPMNILD LYLDSLRAFG IDPAKHDIRF VEDDWESPTL 120
  121 GAWGLGWEVW LDGMEITQFT YFQQAGGIDL KPVSSEITYG CERIAMYLQG VDNVYDLEWV 180
  181 KGVSYGDIHH RTEVEFSTYN FEEADVDMLL TLFTMYEKEC VRLVERGLVL PAYDFVMKCS 240
  241 HTFNLLDARG AISVTERASY IGRVRNVARL CAEGYLKLRE SLGFPLLKGG RK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] PSI-BLAST 153.0 Glycyl-tRNA synthetase (GlyRS) alpha chain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glycine-tRNA ligase activity
    		•  13.4352200543886 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  7.89468709683036 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  7.89468709683036 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  7.88410036819636 bayes_pls_golite062009
  • ligase activity
    		•  6.92073480193262 bayes_pls_golite062009
  • phenylalanine-tRNA ligase activity
    		•  3.4145644216516 bayes_pls_golite062009
  • threonine-tRNA ligase activity
    		•  2.18642354927 bayes_pls_golite062009
  • serine-tRNA ligase activity
    		•  2.07594942154162 bayes_pls_golite062009
  • catalytic activity
    		•  1.99372273395202 bayes_pls_golite062009
  • alanine-tRNA ligase activity
    		•  1.82594054955281 bayes_pls_golite062009
  • lysine-tRNA ligase activity
    		•  1.72324031407565 bayes_pls_golite062009
  • histidine-tRNA ligase activity
    		•  1.72215103383322 bayes_pls_golite062009
  • asparagine-tRNA ligase activity
    		•  0.921492123574877 bayes_pls_golite062009
  • binding
    		•  0.311307565529325 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
    		•  0.00572514744734753 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle