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Protein Overview: gi|39995185, gi|...

General Information:
Name(s) found: gi|39995185 [NCBI NR]
gi|39981947 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39995185|ref|NP_951136.1| isoprenoid biosynthesis protein [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39981947|gb|AAR33409.1| enhancing lycopene biosynthesis protein 2 [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 217 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: isoprenoid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: catalytic activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIGVVLSG CGVYDGSEIH EAVLTLLAID RNGAEAVCMA PSMEFREVNH LTSQETGATR  60
   61 NALVEAARIA RGKIRDVKDV SAVELDAVIF PGGYGAAKNL CTFAEKGAAA TINPEVARLI 120
  121 REMAVAKKPI GAICIAPALI AATLGRDYKP KVTIGTDAGT AAAITETGSE HVSCPVAEFV 180
  181 VDRENKIVTT PAYMLANRIS EAAEGIEKAV KAVVEMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] PSI-BLAST 45.30103 Crystal structure of enhancing lycopene biosynthesis protein 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • protein binding
    		•  1.06565672438103 bayes_pls_golite062009
  • ligase activity
    		•  0.606811845310629 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.59602498623822 bayes_pls_golite062009
  • binding
    		•  0.588714599255874 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle