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Protein Overview: GIS_ARATH

General Information:
Name(s) found: GIS_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: response to gibberellin stimulus [IMP]
    trichome branching [IMP]
    regulation of transcription [TAS]
    trichome differentiation [IMP]
    Molecular Function: nucleic acid binding [ISS]
    zinc ion binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEATGETET QDFMNVESFS QLPFIRRPKD KNPKPIRVFG KDFTGRDFSI TTGQEDYTDP  60
   61 YQTKNKEEEE EEDQTGDNST DNNSISHNRR FECHYCFRNF PTSQALGGHQ NAHKRERQLA 120
  121 KRGVSSYFYH PDNNPYSYRH YPSWTNGPLT AARSYGGFSS GPKPSGYYTR PSYGSQLGLW 180
  181 RLPPRVQGVY NSNAAFTSNG SSSSSNSTLP LLTRSQTQLS SQVGGSAAQN RMSSYGYGLS 240
  241 PNVQDHVSLD LHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] PSI-BLAST 4.30103 Solution Structure of the zinc finger domain of Transcriptional repressor CTCF protein
    2 View Details [88..253] PSI-BLAST 58.0 No description for 2i13A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.414217765611205 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle