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Protein Overview: gi|29655194, gi|...

General Information:
Name(s) found: gi|29655194 [NCBI NR]
gi|29542466 [NCBI NR]
Description(s) found:
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  • gi|29655194|ref|NP_820886.1| RNA polymerase factor sigma-32 [Coxiella burnetii RSA 493] [NCBI NR]
  • gi|29542466|gb|AAO91400.1| RNA polymerase sigma-32 factor [Coxiella burnetii RSA 493] [NCBI NR]
  • RNA polymerase sigma-32 factor [Coxiella burnetii RSA 493]gi|29542466|gb|AAO91400.1| RNA polymerase sigma-32 factor [Coxiella burnetii RSA 493]gi|6716381|gb|AAF26609.1| heat-shock sigma factor [Coxiella burnetii] [nrdb_11152004_Chlamydomonas]
  • RNA polymerase sigma factor [Coxiella burnetii RSA 493] [nr-271106-contam.fasta]
  • RNA polymerase sigma-32 factor [Coxiella burnetii RSA 493] [nr-271106-contam.fasta]
    • Organism: Coxiella burnetii RSA 493
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transcription initiation [ISSLink to PubMed article]
    Molecular Function: sigma factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQFLTRVEE RSLSIGSIGS YISWVNRIPL LSAEEEHDLA NKFRQSNDLE AARKLVLSHL  60
   61 RFVVRIARGY SGYGLSQADL IQEGNIGLMK AVKRFDPQVG VRLVSFAVHW IRAEIHEFIL 120
  121 KNWRIVKIAT TKAQRKLFFN LRKHAKKRGW FSDHEAFALA EELNVSTKDV RQMEERLNSY 180
  181 DEAFDGADEE SDSGTPSWGA PAHYLEDKRY NPALQLERSN WADDQEHRLH NAMQSMDDRS 240
  241 RDILYQRWLS EKKSTLHELA AQYAVSAERI RQLEKNAMQK IRTAMADE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..288] PSI-BLAST 53.0 DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle