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Protein Overview: RL25_COXBU

General Information:
Name(s) found: RL25_COXBU [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • 50S ribosomal protein L25 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=rplY PE=3 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to stress [ISSLink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]
    5S rRNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAESFELIA ELREFTGKSA ARRMRRFEDK VPGTVYGAGK APQSITLLQK DLLKALESES  60
   61 TFSSILTLKV GDKKQKVILK ALQRHHTKPK IVHIDFQRIK ASEKLIMNVP LHFLGEDDCP 120
  121 GVEAGGVVSH LQSEVEIRCL PADLPEYIEV DLSHLQLDES VHLSNLKLPA GVGLTSAVDE 180
  181 EHDSPIASVH MPRVSKADVE AEAAEAALAK EAATEAAEEE ETEKPASEAE ASGEAEQADT 240
  241 DKKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 52.522879 50S subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.1665304403994 bayes_pls_golite062009
  • structural molecule activity
    		•  8.59459543213994 bayes_pls_golite062009
  • 5S rRNA binding
    		•  4.70443838393432 bayes_pls_golite062009
  • rRNA binding
    		•  4.2844525979436 bayes_pls_golite062009
  • RNA binding
    		•  4.0807034963688 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.64595792001211 bayes_pls_golite062009
  • binding
    		•  2.0872529467434 bayes_pls_golite062009
  • protein binding
    		•  0.155133084870595 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle