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Protein Overview: SECB_COXBU

General Information:
Name(s) found: SECB_COXBU [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Protein-export protein SecB OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=secB PE=3 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 161 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    type II protein secretion system complex [ISSLink to PubMed article]
    Biological Process: protein secretion by the type II secretion system [ISSLink to PubMed article]
    protein stabilization [ISSLink to PubMed article]
    Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity [ISSLink to PubMed article]
    unfolded protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQNQRTNT PDNGPEFAIQ RLYIKDLSFE APRSPQVFLE EWQPELNMDL ATKVNDLGED  60
   61 NHEVVLTVTV TVTMKESHIF LAEVQQGGIF TIKNFPKEEM RPMLGSFCPN ILYPYAREAI 120
  121 TDMVVRGGFP QLYLAPVNFD ALFEQHEQSE EGNSGTEDRV H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] PSI-BLAST 64.39794 Crystal Structure of SecB from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein transporter activity
    		•  6.35026304666251 bayes_pls_golite062009
  • unfolded protein binding
    		•  4.94018795702992 bayes_pls_golite062009
  • binding
    		•  2.83315924084513 bayes_pls_golite062009
  • protein binding
    		•  1.68053363123835 bayes_pls_golite062009
  • transporter activity
    		•  1.14731421693772 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.747128915267314 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.658797982643155 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  0.1698588415231 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.123631482979072 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle