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Protein Overview: LIPB_COXBU

General Information:
Name(s) found: LIPB_COXBU [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Octanoyltransferase OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=lipB PE=3 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipoate biosynthetic process [ISSLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDVIIRQLA HLIPYQPLWE AMQTFTARRQ SQTTDEIWFL EHEPVFTQGL AGKPEHVLNS  60
   61 GNIPLIRTDR GGQVTYHGPG QLMMYLLLDL NRLGLSTRTF VRTIENTVAE SLQEWGIPAQ 120
  121 GKETAPGVYV DDKKICSIGL RVRKGFSYHG LALNVAMDLT PFSCINPCGF KGLTMTQIQD 180
  181 YVNPIEMDAV KRTIIPLFLK NFGYNQPAIM VETSLEFLID DHLRSFSEKL GERETVTNSR 240
  241 QN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] PSI-BLAST 49.522879 Title withheld

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-oxygen bonds
    		•  3.33073922220594 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  3.33073922220594 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  3.33034630936933 bayes_pls_golite062009
  • ligase activity
    		•  3.05852492533937 bayes_pls_golite062009
  • catalytic activity
    		•  2.36416267096403 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle