YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Y955_SYNY3

General Information:
Name(s) found: Y955_SYNY3 [Swiss-Prot]
Description(s) found:
  • Uncharacterized tRNA/rRNA methyltransferase slr0955 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0955 PE=3 SV=1 [Swiss-Prot]
    • Organism: Synechocystis sp. PCC 6803 substr. Kazusa
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEMPKKKFS PRSARGDKPR YGEQKPKLKR SGDKPRFNDD QPQGFKEKSD RFQDKPRPRT  60
   61 NDDKPRRAGD KPSNFKSRFK DKDRDKPRYG DDRPRRSGQK PPFGKTFPAA PPPMDSEQAQ 120
  121 EALDLLYGHH AVLAALDGDR QLNRIWITSH LRHDIRYRTK IQTAKANGTV VDEVDNFRLN 180
  181 QITHNANHQG IAAQVAPYHY WELGDLIDKA KSQSTAPVLI IIDSITDPHN LGAIIRTAEA 240
  241 FGAQGMVLPQ RRVAGITSTV MKVAAGALEH FPVARVVNLS RALETLKESG FWIYGTVAGK 300
  301 QTALHQADLR EPMGLVIGSE GEGLSLLTQK HCDHLITIPL AGKTPSLNAS VAAAISLYEI 360
  361 FRQRGFDRPT LSHTASDLRE VSED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] FFAS03 1.13 No description for 2j63A was found.
    2 View Details [119..384] PSI-BLAST 63.30103 RlmB, C-terminal domain; RlmB, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • RNA methyltransferase activity
    		•  4.77771076540343 bayes_pls_golite062009
  • methyltransferase activity
    		•  4.0901595540349 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  4.01958090893547 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  3.659149846946 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  2.59156540645412 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  2.52700462137917 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
    		•  2.29844424181442 bayes_pls_golite062009
  • tRNA (guanine-N1-)-methyltransferase activity
    		•  2.0947794364355 bayes_pls_golite062009
  • transferase activity
    		•  1.84002196534744 bayes_pls_golite062009
  • catalytic activity
    		•  1.16774040077235 bayes_pls_golite062009
  • rRNA (guanosine-2'-O-)-methyltransferase activity
    		•  0.778889412216451 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  0.47764353619615 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  0.0655574594365502 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.0643795631250501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle