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Protein Overview: gi|26109738, gi|...

General Information:
Name(s) found: gi|26249330 [NCBI NR]
gi|26109738 [NCBI NR]
Description(s) found:
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  • gi|26249330|ref|NP_755370.1| ribose-5-phosphate isomerase A [Escherichia coli CFT073] [NCBI NR]
  • gi|26109738|gb|AAN81943.1|AE016766_31 Ribose 5-phosphate isomerase A [Escherichia coli CFT073] [NCBI NR]
  • Ribose 5-phosphate isomerase A [Escherichia coli CFT073]gi|24114166|ref|NP_708676.1| ribose-5-phosphate isomerase, constitutive [Shigella flexneri 2a str. 301]gi|24053307|gb|AAN44383.1| ribose-5-phosphate isomerase, constitutive [Shigella flexneri 2a st [nrdb_11152004_Chlamydomonas]
  • Ribose 5-phosphate isomerase A [Escherichia coli CFT073] [nr-271106-contam.fasta]
  • ribose-5-phosphate isomerase A [Escherichia coli CFT073] [nr-271106-contam.fasta]
    • Organism: Escherichia coli CFT073
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTGSESLFL YIMRVKFHTT GETIMTQDEL KKAVGWAALQ YVQPGTIVGV GTGSTAAHFI  60
   61 DALGTMKGQI EGAVSSSDAS TEKLKSLGIH VFDLNEVDSL GIYVDGADEI NGHMQMIKGG 120
  121 GAALTREKII ASVAEKFICI ADASKQVDIL GKFPLPVEVI PMARSAVARQ LVKLGGRPEY 180
  181 RQGVVTDNGN VILDVHGMEI LDPIAMENAI NAIPGVVTVG LFANRGADVA LIGTPDGVKT 240
  241 IVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 76.69897 D-ribose-5-phosphate isomerase (RpiA), catalytic domain; D-ribose-5-phosphate isomerase (RpiA), lid domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribose-5-phosphate isomerase activity
    		•  2.23318567990318 bayes_pls_golite062009
  • 6-phosphogluconolactonase activity
    		•  1.97756803122763 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.61058174487002 bayes_pls_golite062009
  • catalytic activity
    		•  0.424959044318554 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.281224782944976 bayes_pls_golite062009
  • binding
    		•  0.228090098582514 bayes_pls_golite062009
  • glucosamine-6-phosphate deaminase activity
    		•  0.111185777194415 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  0.075853172283603 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle