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Protein Overview: gi|24376247, gi|...

General Information:
Name(s) found: gi|24376373 [NCBI NR]
gi|24376247 [NCBI NR]
gi|24345287 [NCBI NR]
gi|24344713 [NCBI NR]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • gi|24376373|ref|NP_720481.1| ISSod9, transposase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24376247|ref|NP_720355.1| ISSod9, transposase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345287|gb|AAN53081.1| TnSon_2 transposase, TnpA_TnSon_2 [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24344713|gb|AAN52955.1| transposase, TnpA_TnSon_1 [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 988 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transposition, DNA-mediated [ISSLink to PubMed article]
    Molecular Function: transposase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRSILSAA ERDSLLVLPD TQDELIRHYT FSEPDLSLIR QRRGDANRLG IAVQLCLLRF  60
   61 PGQGLLPDAT VPMPLLQWIG QQLQLDPVCW PQYAEREETR REHLLELRVY LGMEPFSQVH 120
  121 HRQAVHTTTE LALQTDKGIV LANSVVETLR HKHIILPTLD VVERVCAEAL TRANRRIYDT 180
  181 LTEPLSGSHR HRLDDLLKLR DNNKTTTLAW LRLSPVKPNS RHMLEHIERL KVWQALDLPI 240
  241 GVDRLIHQNR LLKIAREGGQ MTPADLAKFE PQRRYATLVA LAIEGMATVT DEIIDLHDRI 300
  301 MGKLFNDAKK RHQKQFQASG KAINAKVRLF GRIGQVLIDA KQAGDDPFAA IEGVISWEAF 360
  361 AKSVTEAQSL AQPEEFDFLY RLGESYATLR RYAPTFLTAL KLRAAPAAKG VLEAIEVLRS 420
  421 MNNDNARKVP ADAPIDFIKP RWQKLVITDT GIDRRYYELC ALSEMRNALR SGDIWVQGSR 480
  481 QFKDFEDYLV PPAKFVSLKQ TNQLPLAVAT DCEQYLNERL TQLETQLATV NSMAQANELP 540
  541 DAIITASGLK ITPLDAVVPD TAQRLIDQAA RILPHVKITE LLLEVDEWTG FTRHFAHLKS 600
  601 GVLAKDKNLL LTTILADAIN LGLTKMAESC PGTTYAKLAW LQAWHIRDET YGAALSELVN 660
  661 AQYRHPFAEH WGDGSTSSSD GQNFRTGNKA ESTGHINPKY GSSPGRTFYT HISDQYAPFH 720
  721 TKVVNVGVRD STYVLDGLLY HESDLRIEEH YTDTAGFTDH VFALMHLLGF RFAPRIRDLG 780
  781 ETKLYIPKRD VTYEGLKSMI GGTLNIKLIR THWDEILRLA TSIKQGTVTA SLMLRKLGSY 840
  841 PRQNGLAVAL RELGRIERTL FILDWLQSVE LRRRVHAGLN KGEARNALAR AVFFNRLGEI 900
  901 RDRSFEQQRY RASGLNLVTA AIVLWNTVYL ERVAHGLRAK GHAVDEELLQ YLSPLGWEHI 960
  961 NLTGDYLWRS SAKIGSGKFR PLRPLSPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] MSA 9.078994 View MSA. No confident structure predictions are available.
    2 View Details [152..267] MSA 3.073985 View MSA. No confident structure predictions are available.
    3 View Details [268..355] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [356..452] MSA 1.073991 View MSA. No confident structure predictions are available.
    5 View Details [453..540] MSA 1.075994 View MSA. No confident structure predictions are available.
    6 View Details [541..665] MSA 2.080963 View MSA. No confident structure predictions are available.
    7 View Details [666..791] MSA 3.091983 View MSA. No confident structure predictions are available.
    8 View Details [792..867] deduced N/A No confident structure predictions are available.
    9 View Details [868..988] MSA 13.107978 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle