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Protein Overview: gi|24376340, gi|...

General Information:
Name(s) found: gi|24376340 [NCBI NR]
gi|24345245 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24376340|ref|NP_720448.1| IS3 family transposase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345245|gb|AAN53048.1|AE015919_3 transposase, IS3 family [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transposition, DNA-mediated [ISSLink to PubMed article]
    Molecular Function: transposase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQLCQLFDV HPSGYYAWRS CAKSKRQCDN ERLIGQLKQC WLESGGVYGY RKLHRDLRDL  60
   61 GEQCGINRVH RLMQRAGQRA QVGYRKPRTR SGEQHVVTQN RLERQFNPLA PNKAWVTDIT 120
  121 YIKTHEGWLY LGAVMDLFSR RIIGWSMGSR ITKELALDAL LMAVWSRKPA GKVLVHSAQG 180
  181 SQYTSHDWSE FLSAHGLEGS MSRRGNCHDN AVAESFFQLL KRERIKRKIY ATRDDAKMDV 240
  241 FNYIEMFYNP KRQHSSNDGL SPLEYERQYF NEVKSRLVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] MSA 18.731997 View MSA. No confident structure predictions are available.
    2 View Details [77..279] FFAS03 3.32 mu transposase, C-terminal domain; mu transposase, core domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle