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Protein Overview: CLASP_ARATH

General Information:
Name(s) found: CLASP_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42570286|ref|NP_849997.2| CLASP (CLIP-ASSOCIATED PROTEIN); binding [Arabidopsis thaliana] [NCBI NR]
  • gi|20259452|gb|AAM13846.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • CLIP-associated protein OS=Arabidopsis thaliana GN=CLASP PE=1 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|42570286|ref|NP_849997.2| CLIP-associating protein (CLASP) -related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 CLIP-associating protein (CLASP) -related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATCLASP, CLASP | ATCLASP/CLASP; binding | chr2:8718943-8725894 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATCLASP, CLASP | CLIP-associated protein | chr2:8711862-8718813 REVERSE LENGTH=1439 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1439 amino acids

    Gene Ontology:
    Cellular Component: spindle microtubule [IDA]
    plasma membrane [IDA]
    Biological Process: mitosis [IMP]
    protein stabilization [IMP]
    cell growth [IMP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEALEMARA KDTKERMAAV ERLHQLLEAS RKSLSPAEVT SLVDSCLDLL KDSNFRVSQG  60
   61 ALQALASAAV LAGEHLKLHL NALVPAVVER LGDSKQPVRD AARRLLTTLM EVSSPTIIVE 120
  121 RAGSYAWMHK SWRVREEFAR TVTSAIGLFA STELPLQRVI LAPILQMLND PNQAVREAAI 180
  181 LCIEEMYMQG GSQFREELQR HHLPSYMVKD INARLERIEP QLRSTDGRSA HHVVNEVKAS 240
  241 SVNPKKSSPR AKAPTRENSL FGGDADITEK PIEPIKVYSE KELIREFEKI AATLVPEKDW 300
  301 SMRISAMRRV EGLVAGGATD YSCFRGLLKQ LVGPLSTQLA DRRSTIVKQA CHLLCLLSKE 360
  361 LLGDFEACAE TFIPVLFKLV VITVLVIAES ADNCIKTMLR NCKAARVLPR IAESAKHDRN 420
  421 AILRARCCEY ALLTLEHWPD APEIQRSVDL YEDLIRCCVA DAMSEVRATA RMCYRMFAKT 480
  481 WPDRSRRLFS SFDPVIQRLI NEEDGGIHRR HASPSVRERH SQPSFSQTSA PSNLPGYGTS 540
  541 AIVAMDRSSN LSSGGSLSSG LLLSQSKDVN KGSERSLESV LQSSKQKVSA IESMLRGLHI 600
  601 SDRQNPAALR SSSLDLGVDP PSSRDPPFHA VAPASNSHTS SAAAESTHSI NKGSNRNGGL 660
  661 GLSDIITQIQ ASKDSGRSSY RGNLLSESHP TFSSLTAKRG SERNERSSLE ESNDAREVRR 720
  721 FMAGHFDRQQ MDTAYRDLTF RESNASHVPN FQRPLLRKNV GGRMSAGRRR SFDDSQLQIG 780
  781 DISNFVDGPA SLNEALNDGL NSSSDWCARV AAFNFLQTLL QQGPKGAQEV IQSFEKVMKL 840
  841 FLRHLDDPHH KVAQAALSTL ADLIPSCRKP FESYMERVLP HVFSRLIDPK EVVRQPCSST 900
  901 LEIVSKTYSV DSLLPALLRS LDEQRSPKAK LAVIEFAINS FNRYAGNPEI SGNSGILKLW 960
  961 LAKLTPLTRD KNTKLKEASI TCIISVYNHY DSAGLLNYIL SLSVEEQNSL RRALKQYTPR1020
 1021 IEVDLLNYMQ SKKEKQRIKS YDPSDAIGTS SEEGYAGASK KNIFLGRYSG GSIDSDSGRK1080
 1081 WSSSQEPTMI TGGVGQNVSS GTQEKLYQNV RTGISSASDL LNPKDSDYTF ASAGQNSISR1140
 1141 TSPNGSSENI EILDDLSPPH LEKNGLNLTS VDSLEGRHEN EVSRELDLGH YMLTSIKVNT1200
 1201 TPESGPSIPQ ILHMINGSDG SPSSSKKSGL QQLIEASVAN EESVWTKYFN QILTVVLEVL1260
 1261 DDEDFSIKEL ALSLISEMLK SQKDAMEDSV EIVIEKLLHV SKDTVPKVST EAEQCLTTVL1320
 1321 SQYDPFRCLS VIVPLLVTED EKTLVACINC LTKLVGRLSQ EELMDQLSSF LPAVFEAFGS1380
 1381 QSADVRKTVV FCLVDIYIML GKAFLPYLEG LNSTQVRLVT IYANRISQAR NGAPIDADT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1159] PSI-BLAST 72.522879 Crystal Structure of The Cand1-Cul1-Roc1 Complex
    2 View Details [1160..1439] PSI-BLAST 69.0 Constant regulatory domain of protein phosphatase 2a, pr65alpha


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle