YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24351191, gi|...

General Information:
Name(s) found: gi|24376150 [NCBI NR]
gi|24351191 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24376150|ref|NP_720193.1| heptosyl transferase glycosyltransferase family 9 protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351191|gb|AAN57637.1|AE015899_9 heptosyl transferase, glycosyltransferase family 9 protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 347 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipopolysaccharide core region biosynthetic process [ISSLink to PubMed article]
    Molecular Function: lipopolysaccharide heptosyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLDINTMNS LCLLRLSAIG DVCHAVAMVQ AIQRQYPHLT ITWVIGKLEY QLLKHLPGIE  60
   61 FVIFDKSQGW RSYFYLHKAL KGRRFDVLLH MQVALRATLA SLAISAKVRV GFDRTRAKEG 120
  121 QWLVTNYRVE PLAQPHVLDG FMGFAKAIGV SDLTPQWNIP VPKADTEFAQ SHIAEGEKVL 180
  181 IICAAASKAE RNWLPKRYVA VAQHAINKGY RVILCGGPTA LEKALAEQIL QACPAKLDNL 240
  241 VGKTSLTQLL ALLKRASLVL APDTGPAHMA VTQGTPVIGL YAHSNPGRTG PYLSQQYVVS 300
  301 AYQEAIASQQ SGEVKWGTRA KGADLMALIS VEAVIDKFDQ VIQQTHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..347] PSI-BLAST 74.69897 ADP-heptose LPS heptosyltransferase II

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • lipopolysaccharide heptosyltransferase activity
    		•  3.44180421678517 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  3.04530122157712 bayes_pls_golite062009
  • catalytic activity
    		•  3.02192459767177 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  2.94500176353224 bayes_pls_golite062009
  • glycogen phosphorylase activity
    		•  2.09116455393465 bayes_pls_golite062009
  • glucosyltransferase activity
    		•  1.8062586862583 bayes_pls_golite062009
  • transferase activity
    		•  1.67770954408305 bayes_pls_golite062009
  • UDP-N-acetylglucosamine 2-epimerase activity
    		•  1.63103907245982 bayes_pls_golite062009
  • UDP-glucosyltransferase activity
    		•  1.4199532885636 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  1.30934991061674 bayes_pls_golite062009
  • glycogen (starch) synthase activity
    		•  0.435616523537281 bayes_pls_golite062009
  • phosphorylase activity
    		•  0.431662083250969 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.27693350081385 bayes_pls_golite062009
  • alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
    		•  0.22009679964126 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle