YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24351191, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLDINTMNS LCLLRLSAIG DVCHAVAMVQ AIQRQYPHLT ITWVIGKLEY QLLKHLPGIE  60
   61 FVIFDKSQGW RSYFYLHKAL KGRRFDVLLH MQVALRATLA SLAISAKVRV GFDRTRAKEG 120
  121 QWLVTNYRVE PLAQPHVLDG FMGFAKAIGV SDLTPQWNIP VPKADTEFAQ SHIAEGEKVL 180
  181 IICAAASKAE RNWLPKRYVA VAQHAINKGY RVILCGGPTA LEKALAEQIL QACPAKLDNL 240
  241 VGKTSLTQLL ALLKRASLVL APDTGPAHMA VTQGTPVIGL YAHSNPGRTG PYLSQQYVVS 300
  301 AYQEAIASQQ SGEVKWGTRA KGADLMALIS VEAVIDKFDQ VIQQTHS

Type	Start	End	Confidence
Signal Peptide	1	25	0.59
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	347	0.98