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Protein Overview: gi|24376146, gi|...

General Information:
Name(s) found: gi|24376146 [NCBI NR]
gi|24351187 [NCBI NR]
Description(s) found:
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  • gi|24376146|ref|NP_720189.1| 2-amino-3-ketobutyrate coenzyme A ligase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351187|gb|AAN57633.1|AE015899_5 2-amino-3-ketobutyrate coenzyme A ligase [Shewanella oneidensis MR-1] [NCBI NR]
  • 2-amino-3-ketobutyrate coenzyme A ligase [Shewanella oneidensis MR-1]gi|24351187|gb|AAN57633.1| 2-amino-3-ketobutyrate coenzyme A ligase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • 2-amino-3-ketobutyrate coenzyme A ligase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: threonine catabolic process [ISSLink to PubMed article]
    Molecular Function: glycine C-acetyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSFYAQI NQQLADVKAE GLYKSERIIA SPQQTAIQVN HQEVVNFCAN NYLGLANHPE  60
   61 LIKAAQQGLD SHGFGMASVR FICGTQDIHK QLEASLSEFL GMEDTILYSS CFDANAGLFE 120
  121 TLLDAEDAII SDALNHASII DGVRLCKAKR FRYANNDMAD LETQLIAAKA AGARNILIAT 180
  181 DGVFSMDGVI ANLQGVCDLA DKYGALVMVD DSHAVGFVGQ NGRGSHEHCG VMGRVDIITG 240
  241 TLGKALGGAS GGFTSGKKEV IDWLRQRSRP YLFSNSLAPS IVTASIHVLE MLKSGQALRE 300
  301 SVWENSRYFR EKMSAAGFTL GGADHAIIPV MIGDAKLASD FANRLLAEHI YVIGFSFPVV 360
  361 PKGQARIRTQ MSAAHTREQL DKAIEAFTRI AKEMAII

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..397] PSI-BLAST 78.045757 2-amino-3-ketobutyrate CoA ligase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 5-aminolevulinate synthase activity
    		•  3.15163480353521 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  2.82458180884712 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • N-succinyltransferase activity
    		•  1.81799375593294 bayes_pls_golite062009
  • threonine aldolase activity
    		•  1.80396420390785 bayes_pls_golite062009
  • adenosylmethionine-8-amino-7-oxononanoate transaminase activity
    		•  1.74778109525713 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.63055151623667 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.63055151623667 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • glycine C-acetyltransferase activity
    		•  0.935794708043259 bayes_pls_golite062009
  • transferase activity
    		•  0.737426388870721 bayes_pls_golite062009
  • carbon-sulfur lyase activity
    		•  0.698312655247044 bayes_pls_golite062009
  • intramolecular transferase activity, transferring amino groups
    		•  0.659071155545801 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.319452731970428 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.15938456446406 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  0.0450490929307473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle