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Protein Overview: gi|24350863, gi|...

General Information:
Name(s) found: gi|24375890 [NCBI NR]
gi|24350863 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24375890|ref|NP_719933.1| glutamine synthetase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350863|gb|AAN57377.1|AE015874_4 glutamine synthetase, type I [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 469 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nitrogen compound metabolic process [ISSLink to PubMed article]
    glutamine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: glutamate-ammonia ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVESVLKQL EELEVKFVDL RFTDTKGKEQ HVSIPSHQVD ADFFEDGKMF DGSSIAGWKG  60
   61 INESDMVLMP DPTTFVLDPF TEETTALIRC DVLEPGTMTG YDRDPRSIAK KAEEYLRSTG 120
  121 IADTVLVGPE PEFFLFDDVR FGTDMSGCFV KIDAKEAAWN SGTSYEGGNT GHRPFVKGGY 180
  181 FPVAPVDSSQ DLRSAMCLVL EEMGQVVEAH HHEVATAGQN EIATRFNTLT KKADEIQILK 240
  241 YVVHNMAHAY GKTATFMPKP IVGDNGSGMH VHQSLSKDGV NLFAGDKYAG LSETALYYIG 300
  301 GIIKHARALN AFTNPSTNSY KRLVPHFEAP VMLAYSARNR SASIRIPVVP SPKGRRIETR 360
  361 FPDPHANPYL GFAALLMAGI DGIQNKIHPG EAMDKDLYDL PAEEAAEIPQ VATSLENALE 420
  421 NLQADHEFLT RGGVFSEDFI QSYIALKSAE AERVARTTHP LEFEMYYSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..469] PSI-BLAST 168.0 Glutamine synthetase, N-terminal domain; Glutamine synthetase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ammonia ligase activity
    		•  6.27241182807427 bayes_pls_golite062009
  • acid-ammonia (or amide) ligase activity
    		•  5.91942691148686 bayes_pls_golite062009
  • ligase activity
    		•  1.27889290664771 bayes_pls_golite062009
  • catalytic activity
    		•  1.08973967683802 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.0373860162850559 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle